Hs00925230_m1

• Gene Symbol: POLR1E
• Gene Name: RNA polymerase I subunit E
• Gene Aliases: PAF53, PRAF1
• Chromosome Location: Chr.9: 37485935 - 37503697 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: POLR1E
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001282766.1	NP_001269695.1	11 - 12	1172		135
	NM_022490.2	NP_071935.1	10 - 11	1078		135
	XM_005251547.2	XP_005251604.1	9 - 10	1323		135
GenBank mRNA	AK023452.1	-	10 - 11	1065		135
	AK024032.1	-	10 - 11	1054		135
	AK091294.1	-	9 - 10	1439		135
	AK225050.1	-	10 - 11	1051		135
	AK301347.1	-	8 - 9	755		135
	AK303167.1	-	11 - 12	1159		135
	BC001337.1	-	10 - 11	1045	3461710	135
	BC014331.1	-	10 - 11	1079	4042929	135
	CR457313.1	-	10 - 11	965		135

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0900012124.hg.1
This assay targets the same location as HTA transcript cluster(s) TC09002930.hg.1

• Set Membership: Ambion siRNA available, Amplicon length greater than or equal to 101, Mammalian Gene Collection, Homo sapiens, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene POLR1E

Panther Classification:

Molecular Function -

DNA-directed RNA polymerase, RNA metabolism protein, nucleic acid metabolism protein

Gene Ontology Categories:

Process(es)

RNA polymerase I transcriptional preinitiation complex assembly at the promoter for the nuclear large rRNA transcript
transcription initiation from RNA polymerase I promoter
transcription elongation from RNA polymerase I promoter
termination of RNA polymerase I transcription
rRNA transcription
positive regulation of gene expression, epigenetic

Function(s)

RNA polymerase I activity
RNA polymerase I transcription factor binding
DNA binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR09002519.hg.1	TC09002930.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR09002519.hg.1	ENST00000377792.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR09002519.hg.1	ENST00000377798.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR09002519.hg.1	ENST00000421959.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR09002519.hg.1	ENST00000442009.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR09002519.hg.1	NM_022490.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0900012124.hg.1	ENST00000377792.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900012124.hg.1	ENST00000377792.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900012124.hg.1	ENST00000377792.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900012124.hg.1	ENST00000377792.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900012124.hg.1	ENST00000377792.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900012124.hg.1	ENST00000377792.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900012124.hg.1	ENST00000377792.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900012124.hg.1	ENST00000377792.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900012124.hg.1	ENST00000377792.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900012124.hg.1	ENST00000377792.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900012124.hg.1	ENST00000377792.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900012124.hg.1	ENST00000377792.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900012124.hg.1	ENST00000377792.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900012124.hg.1	ENST00000377792.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900012124.hg.1	ENST00000377798.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900012124.hg.1	ENST00000377798.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900012124.hg.1	ENST00000377798.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900012124.hg.1	ENST00000377798.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900012124.hg.1	ENST00000377798.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900012124.hg.1	ENST00000377798.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900012124.hg.1	ENST00000377798.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900012124.hg.1	ENST00000377798.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900012124.hg.1	ENST00000377798.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900012124.hg.1	ENST00000377798.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900012124.hg.1	ENST00000377798.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900012124.hg.1	ENST00000377798.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900012124.hg.1	ENST00000377798.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900012124.hg.1	ENST00000377798.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900012124.hg.1	ENST00000377798.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900012124.hg.1	ENST00000442009.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900012124.hg.1	ENST00000442009.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900012124.hg.1	ENST00000442009.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900012124.hg.1	ENST00000442009.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900012124.hg.1	ENST00000442009.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900012124.hg.1	ENST00000442009.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900012124.hg.1	ENST00000442009.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900012124.hg.1	ENST00000442009.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900012124.hg.1	ENST00000442009.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900012124.hg.1	ENST00000442009.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900012124.hg.1	ENST00000442009.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900012124.hg.1	ENST00000442009.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900012124.hg.1	ENST00000442009.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900012124.hg.1	ENST00000442009.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900012124.hg.1	ENST00000442009.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900012124.hg.1	NM_001282766.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0900012124.hg.1	NM_001282766.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0900012124.hg.1	NM_001282766.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0900012124.hg.1	NM_001282766.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0900012124.hg.1	NM_001282766.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0900012124.hg.1	NM_001282766.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0900012124.hg.1	NM_001282766.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0900012124.hg.1	NM_001282766.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0900012124.hg.1	NM_001282766.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0900012124.hg.1	NM_001282766.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0900012124.hg.1	NM_001282766.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0900012124.hg.1	NM_001282766.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0900012124.hg.1	NM_001282766.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0900012124.hg.1	NM_001282766.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0900012124.hg.1	NM_001282766.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0900012124.hg.1	NM_001282766.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0900012124.hg.1	NM_022490.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0900012124.hg.1	NM_022490.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0900012124.hg.1	NM_022490.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0900012124.hg.1	NM_022490.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0900012124.hg.1	NM_022490.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0900012124.hg.1	NM_022490.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0900012124.hg.1	NM_022490.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0900012124.hg.1	NM_022490.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0900012124.hg.1	NM_022490.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0900012124.hg.1	NM_022490.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0900012124.hg.1	NM_022490.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0900012124.hg.1	NM_022490.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0900012124.hg.1	NM_022490.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0900012124.hg.1	NM_022490.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0900012124.hg.1	NM_022490.2	Refseq
Affymetrix Human Clariom D Assay	PSR0900183894.hg.1	ENST00000377792.3	Ensembl
Affymetrix Human Clariom D Assay	PSR0900183894.hg.1	ENST00000377798.8	Ensembl
Affymetrix Human Clariom D Assay	PSR0900183894.hg.1	ENST00000442009.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0900183894.hg.1	NM_001282766.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900183894.hg.1	NM_022490.2	Refseq
Affymetrix Human Clariom D Assay	PSR0900183894.hg.1	ENST00000377792.3	Ensembl
Affymetrix Human Clariom D Assay	PSR0900183894.hg.1	ENST00000377798.8	Ensembl
Affymetrix Human Clariom D Assay	PSR0900183894.hg.1	ENST00000442009.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0900183894.hg.1	NM_001282766.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900183894.hg.1	NM_022490.2	Refseq
Affymetrix Human Clariom D Assay	PSR0900183894.hg.1	TC0900012124.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	TC0900012124.hg.1	ENST00000377792.3	Ensembl
Affymetrix Human Clariom D Assay	TC0900012124.hg.1	ENST00000377792.3	Ensembl
Affymetrix Human Clariom D Assay	TC0900012124.hg.1	ENST00000377792.3	Ensembl
Affymetrix Human Clariom D Assay	TC0900012124.hg.1	ENST00000377792.3	Ensembl
Affymetrix Human Clariom D Assay	TC0900012124.hg.1	ENST00000377792.3	Ensembl
Affymetrix Human Clariom D Assay	TC0900012124.hg.1	ENST00000377792.3	Ensembl
Affymetrix Human Clariom D Assay	TC0900012124.hg.1	ENST00000377792.3	Ensembl
Affymetrix Human Clariom D Assay	TC0900012124.hg.1	ENST00000377792.3	Ensembl
Affymetrix Human Clariom D Assay	TC0900012124.hg.1	ENST00000377792.3	Ensembl
Affymetrix Human Clariom D Assay	TC0900012124.hg.1	ENST00000377792.3	Ensembl
Affymetrix Human Clariom D Assay	TC0900012124.hg.1	ENST00000377792.3	Ensembl
Affymetrix Human Clariom D Assay	TC0900012124.hg.1	ENST00000377792.3	Ensembl
Affymetrix Human Clariom D Assay	TC0900012124.hg.1	ENST00000377792.3	Ensembl
Affymetrix Human Clariom D Assay	TC0900012124.hg.1	ENST00000377792.3	Ensembl
Affymetrix Human Clariom D Assay	TC0900012124.hg.1	ENST00000377798.8	Ensembl
Affymetrix Human Clariom D Assay	TC0900012124.hg.1	ENST00000377798.8	Ensembl
Affymetrix Human Clariom D Assay	TC0900012124.hg.1	ENST00000377798.8	Ensembl
Affymetrix Human Clariom D Assay	TC0900012124.hg.1	ENST00000377798.8	Ensembl
Affymetrix Human Clariom D Assay	TC0900012124.hg.1	ENST00000377798.8	Ensembl
Affymetrix Human Clariom D Assay	TC0900012124.hg.1	ENST00000377798.8	Ensembl
Affymetrix Human Clariom D Assay	TC0900012124.hg.1	ENST00000377798.8	Ensembl
Affymetrix Human Clariom D Assay	TC0900012124.hg.1	ENST00000377798.8	Ensembl
Affymetrix Human Clariom D Assay	TC0900012124.hg.1	ENST00000377798.8	Ensembl
Affymetrix Human Clariom D Assay	TC0900012124.hg.1	ENST00000377798.8	Ensembl
Affymetrix Human Clariom D Assay	TC0900012124.hg.1	ENST00000377798.8	Ensembl
Affymetrix Human Clariom D Assay	TC0900012124.hg.1	ENST00000377798.8	Ensembl
Affymetrix Human Clariom D Assay	TC0900012124.hg.1	ENST00000377798.8	Ensembl
Affymetrix Human Clariom D Assay	TC0900012124.hg.1	ENST00000377798.8	Ensembl
Affymetrix Human Clariom D Assay	TC0900012124.hg.1	ENST00000377798.8	Ensembl
Affymetrix Human Clariom D Assay	TC0900012124.hg.1	ENST00000442009.6	Ensembl
Affymetrix Human Clariom D Assay	TC0900012124.hg.1	ENST00000442009.6	Ensembl
Affymetrix Human Clariom D Assay	TC0900012124.hg.1	ENST00000442009.6	Ensembl
Affymetrix Human Clariom D Assay	TC0900012124.hg.1	ENST00000442009.6	Ensembl
Affymetrix Human Clariom D Assay	TC0900012124.hg.1	ENST00000442009.6	Ensembl
Affymetrix Human Clariom D Assay	TC0900012124.hg.1	ENST00000442009.6	Ensembl
Affymetrix Human Clariom D Assay	TC0900012124.hg.1	ENST00000442009.6	Ensembl
Affymetrix Human Clariom D Assay	TC0900012124.hg.1	ENST00000442009.6	Ensembl
Affymetrix Human Clariom D Assay	TC0900012124.hg.1	ENST00000442009.6	Ensembl
Affymetrix Human Clariom D Assay	TC0900012124.hg.1	ENST00000442009.6	Ensembl
Affymetrix Human Clariom D Assay	TC0900012124.hg.1	ENST00000442009.6	Ensembl
Affymetrix Human Clariom D Assay	TC0900012124.hg.1	ENST00000442009.6	Ensembl
Affymetrix Human Clariom D Assay	TC0900012124.hg.1	ENST00000442009.6	Ensembl
Affymetrix Human Clariom D Assay	TC0900012124.hg.1	ENST00000442009.6	Ensembl
Affymetrix Human Clariom D Assay	TC0900012124.hg.1	ENST00000442009.6	Ensembl
Affymetrix Human Clariom D Assay	TC0900012124.hg.1	NM_001282766.1	Refseq
Affymetrix Human Clariom D Assay	TC0900012124.hg.1	NM_001282766.1	Refseq
Affymetrix Human Clariom D Assay	TC0900012124.hg.1	NM_001282766.1	Refseq
Affymetrix Human Clariom D Assay	TC0900012124.hg.1	NM_001282766.1	Refseq
Affymetrix Human Clariom D Assay	TC0900012124.hg.1	NM_001282766.1	Refseq
Affymetrix Human Clariom D Assay	TC0900012124.hg.1	NM_001282766.1	Refseq
Affymetrix Human Clariom D Assay	TC0900012124.hg.1	NM_001282766.1	Refseq
Affymetrix Human Clariom D Assay	TC0900012124.hg.1	NM_001282766.1	Refseq
Affymetrix Human Clariom D Assay	TC0900012124.hg.1	NM_001282766.1	Refseq
Affymetrix Human Clariom D Assay	TC0900012124.hg.1	NM_001282766.1	Refseq
Affymetrix Human Clariom D Assay	TC0900012124.hg.1	NM_001282766.1	Refseq
Affymetrix Human Clariom D Assay	TC0900012124.hg.1	NM_001282766.1	Refseq
Affymetrix Human Clariom D Assay	TC0900012124.hg.1	NM_001282766.1	Refseq
Affymetrix Human Clariom D Assay	TC0900012124.hg.1	NM_001282766.1	Refseq
Affymetrix Human Clariom D Assay	TC0900012124.hg.1	NM_001282766.1	Refseq
Affymetrix Human Clariom D Assay	TC0900012124.hg.1	NM_001282766.1	Refseq
Affymetrix Human Clariom D Assay	TC0900012124.hg.1	NM_022490.2	Refseq
Affymetrix Human Clariom D Assay	TC0900012124.hg.1	NM_022490.2	Refseq
Affymetrix Human Clariom D Assay	TC0900012124.hg.1	NM_022490.2	Refseq
Affymetrix Human Clariom D Assay	TC0900012124.hg.1	NM_022490.2	Refseq
Affymetrix Human Clariom D Assay	TC0900012124.hg.1	NM_022490.2	Refseq
Affymetrix Human Clariom D Assay	TC0900012124.hg.1	NM_022490.2	Refseq
Affymetrix Human Clariom D Assay	TC0900012124.hg.1	NM_022490.2	Refseq
Affymetrix Human Clariom D Assay	TC0900012124.hg.1	NM_022490.2	Refseq
Affymetrix Human Clariom D Assay	TC0900012124.hg.1	NM_022490.2	Refseq
Affymetrix Human Clariom D Assay	TC0900012124.hg.1	NM_022490.2	Refseq
Affymetrix Human Clariom D Assay	TC0900012124.hg.1	NM_022490.2	Refseq
Affymetrix Human Clariom D Assay	TC0900012124.hg.1	NM_022490.2	Refseq
Affymetrix Human Clariom D Assay	TC0900012124.hg.1	NM_022490.2	Refseq
Affymetrix Human Clariom D Assay	TC0900012124.hg.1	NM_022490.2	Refseq
Affymetrix Human Clariom D Assay	TC0900012124.hg.1	NM_022490.2	Refseq