Hs00925857_m1

• Gene Symbol: BPTF
• Gene Name: bromodomain PHD finger transcription factor
• Gene Aliases: FAC1, FALZ, NURF301
• Chromosome Location: Chr.17: 67825517 - 67984378 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: BPTF
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_004459.6	NP_004450.3	19 - 20	6586		68
	NM_182641.3	NP_872579.2	17 - 18	6208		68
	XM_005257150.3	XP_005257207.1	20 - 21	6895		68
	XM_005257151.3	XP_005257208.1	20 - 21	6892		68
	XM_005257152.2	XP_005257209.1	20 - 21	6895		68
	XM_005257153.3	XP_005257210.1	19 - 20	6733		68
	XM_005257154.3	XP_005257211.1	20 - 21	6895		68
	XM_005257155.3	XP_005257212.1	19 - 20	6706		68
	XM_005257156.3	XP_005257213.1	19 - 20	6706		68
	XM_005257157.3	XP_005257214.1	19 - 20	6703		68
	XM_005257158.3	XP_005257215.1	18 - 19	6517		68
	XM_005257159.2	XP_005257216.1	20 - 21	6895		68
	XM_005257160.2	XP_005257217.1	19 - 20	6733		68
	XM_005257161.3	XP_005257218.1	20 - 21	6895		68
	XM_011524520.2	XP_011522822.1	20 - 21	6892		68
	XM_011524521.2	XP_011522823.1	19 - 20	6703		68
	XM_011524522.2	XP_011522824.1	18 - 19	6514		68
	XM_011524523.2	XP_011522825.1	17 - 18	6352		68
	XM_011524524.2	XP_011522826.1	12 - 13	3856		68
	XM_011524525.2	XP_011522827.1	17 - 18	6352		68
	XM_011524526.2	XP_011522828.1	17 - 18	6352		68
	XM_017024353.1	XP_016879842.1	20 - 21	6895		68
	XM_017024354.1	XP_016879843.1	14 - 15	5624		68
GenBank mRNA	AB032251.1	-	17 - 18	6201		68
	AK022570.1	-	5 - 6	686		68
	AK025776.1	-	7 - 8	2031		68
	AY282495.1	-	19 - 20	6108		68
	BQ716216.1	-	4 - 5	558		68

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC1700008709.hg.1
This assay targets the same location as HTA transcript cluster(s) TC17002859.hg.1

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, Homo sapiens, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene BPTF

Gene Ontology Categories:

Process(es)

negative regulation of transcription by RNA polymerase II
embryonic placenta development
chromatin remodeling
transcription, DNA-templated
regulation of transcription, DNA-templated
brain development
endoderm development
response to wounding
anterior/posterior pattern specification
positive regulation of transcription, DNA-templated
cellular response to nerve growth factor stimulus

Function(s)

protein binding
ATP-dependent activity, acting on DNA
transcription factor binding
zinc ion binding
sequence-specific DNA binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	TC1700010337.hg.1	ENST00000580412.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700010337.hg.1	ENST00000580412.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700010337.hg.1	ENST00000580412.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700010337.hg.1	ENST00000580412.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700010337.hg.1	ENST00000580412.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700010337.hg.1	ENST00000583895.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700010337.hg.1	ENST00000583895.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700010337.hg.1	ENST00000583895.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700010337.hg.1	ENST00000583895.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700010337.hg.1	ENST00000583895.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR17010348.hg.1	ENST00000306378.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR17010348.hg.1	ENST00000321892.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR17010348.hg.1	ENST00000335221.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR17010348.hg.1	ENST00000424123.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR17010348.hg.1	NM_004459.6	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR17010348.hg.1	NM_182641.3	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR17010348.hg.1	TC17002859.hg.1	HTA TC
Affymetrix Human Clariom D Assay	PSR1700164986.hg.1	ENST00000306378.10	Ensembl
Affymetrix Human Clariom D Assay	PSR1700164986.hg.1	ENST00000321892.8	Ensembl
Affymetrix Human Clariom D Assay	PSR1700164986.hg.1	ENST00000424123.7	Ensembl
Affymetrix Human Clariom D Assay	PSR1700164986.hg.1	ENST00000544778.6	Ensembl
Affymetrix Human Clariom D Assay	PSR1700164986.hg.1	ENST00000582467.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1700164986.hg.1	NM_004459.6	Refseq
Affymetrix Human Clariom D Assay	PSR1700164986.hg.1	NM_182641.3	Refseq
Affymetrix Human Clariom D Assay	PSR1700164986.hg.1	TC1700008709.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1700164986.hg.1	ENST00000321892.8	Ensembl
Affymetrix Human Clariom D Assay	PSR1700164986.hg.1	ENST00000306378.10	Ensembl
Affymetrix Human Clariom D Assay	PSR1700164986.hg.1	ENST00000424123.7	Ensembl
Affymetrix Human Clariom D Assay	PSR1700164986.hg.1	ENST00000544778.6	Ensembl
Affymetrix Human Clariom D Assay	PSR1700164986.hg.1	ENST00000582467.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1700164986.hg.1	NM_004459.6	Refseq
Affymetrix Human Clariom D Assay	PSR1700164986.hg.1	NM_182641.3	Refseq
Affymetrix Human Clariom D Assay	TC1700010337.hg.1	ENST00000580412.1	Ensembl
Affymetrix Human Clariom D Assay	TC1700010337.hg.1	ENST00000580412.1	Ensembl
Affymetrix Human Clariom D Assay	TC1700010337.hg.1	ENST00000580412.1	Ensembl
Affymetrix Human Clariom D Assay	TC1700010337.hg.1	ENST00000580412.1	Ensembl
Affymetrix Human Clariom D Assay	TC1700010337.hg.1	ENST00000580412.1	Ensembl
Affymetrix Human Clariom D Assay	TC1700010337.hg.1	ENST00000583895.6	Ensembl
Affymetrix Human Clariom D Assay	TC1700010337.hg.1	ENST00000583895.6	Ensembl
Affymetrix Human Clariom D Assay	TC1700010337.hg.1	ENST00000583895.6	Ensembl
Affymetrix Human Clariom D Assay	TC1700010337.hg.1	ENST00000583895.6	Ensembl
Affymetrix Human Clariom D Assay	TC1700010337.hg.1	ENST00000583895.6	Ensembl