Hs00934060_m1

• Gene Symbol: LIG4
• Gene Name: DNA ligase 4
• Gene Aliases: LIG4S
• Chromosome Location: Chr.13: 108207442 - 108218368 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: LIG4
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_002312.3	NP_002303.2	1 - 2	245		111
	NM_206937.1	NP_996820.1	2 - 3	124		111
	XM_005254057.4	XP_005254114.1	2 - 3	259		111
	XM_006719951.3	XP_006720014.1	2 - 3	1964		111
	XM_011521091.2	XP_011519393.1	3 - 4	586		111
	XM_011521092.2	XP_011519394.1	2 - 3	162		111
	XM_017020569.1	XP_016876058.1	3 - 4	2227		111
	XM_017020570.1	XP_016876059.1	3 - 4	506		111
GenBank mRNA	BC037491.2	-	2 - 3	124	5259632	111
	X83441.1	-	1 - 2	245		111

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC1300009740.hg.1
This assay targets the same location as HTA transcript cluster(s) TC13000867.hg.1

Additional Information:

This assay is in the 5'UTR region of the BC037491.2,NM_002312.3,NM_206937.1,X83441.1,XM_005254057.4,XM_006719951.3,XM_011521091.2,XM_011521092.2,XM_017020569.1,XM_017020570.1 transcripts.

• Set Membership: Ambion siRNA available, Amplicon length greater than or equal to 101, Mammalian Gene Collection, Homo sapiens, 1700, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene LIG4

Panther Classification:

Molecular Function -

DNA metabolism protein

Gene Ontology Categories:

Process(es)

single strand break repair
in utero embryonic development
pro-B cell differentiation
DNA ligation
lagging strand elongation
nucleotide-excision repair, DNA gap filling
double-strand break repair
double-strand break repair via nonhomologous end joining
cell cycle
central nervous system development
cell proliferation
response to X-ray
response to gamma radiation
T cell differentiation in thymus
V(D)J recombination
immunoglobulin V(D)J recombination
T cell receptor V(D)J recombination
somatic stem cell population maintenance
negative regulation of neuron apoptotic process
isotype switching
positive regulation of fibroblast proliferation
positive regulation of neurogenesis
DNA ligation involved in DNA recombination
DNA ligation involved in DNA repair
chromosome organization
cell division
neuron apoptotic process
cellular response to lithium ion
DNA biosynthetic process
establishment of integrated proviral latency
double-strand break repair via classical nonhomologous end joining
positive regulation of chromosome organization

Function(s)

DNA binding
DNA ligase activity
DNA ligase (ATP) activity
protein binding
ATP binding
protein C-terminus binding
ligase activity
metal ion binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR13009687.hg.1	ENST00000356922.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR13009687.hg.1	NM_002312.3	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR13009687.hg.1	TC13000867.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	TC1300009740.hg.1	ENST00000356922.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1300009740.hg.1	ENST00000356922.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1300009740.hg.1	ENST00000356922.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1300009740.hg.1	ENST00000356922.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1300009740.hg.1	ENST00000356922.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1300009740.hg.1	ENST00000356922.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1300009740.hg.1	ENST00000405925.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1300009740.hg.1	ENST00000405925.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1300009740.hg.1	ENST00000405925.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1300009740.hg.1	ENST00000405925.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1300009740.hg.1	ENST00000405925.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1300009740.hg.1	ENST00000442234.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1300009740.hg.1	ENST00000442234.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1300009740.hg.1	ENST00000442234.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1300009740.hg.1	ENST00000442234.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1300009740.hg.1	ENST00000442234.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1300009740.hg.1	ENST00000442234.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1300009740.hg.1	ENST00000611712.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1300009740.hg.1	ENST00000611712.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1300009740.hg.1	ENST00000611712.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1300009740.hg.1	ENST00000611712.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1300009740.hg.1	ENST00000611712.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1300009740.hg.1	ENST00000611712.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1300009740.hg.1	ENST00000611712.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1300009740.hg.1	ENST00000611712.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1300009740.hg.1	ENST00000614526.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1300009740.hg.1	ENST00000614526.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1300009740.hg.1	ENST00000614526.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1300009740.hg.1	ENST00000614526.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1300009740.hg.1	NM_001098268.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1300009740.hg.1	NM_001098268.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1300009740.hg.1	NM_001098268.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1300009740.hg.1	NM_001098268.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1300009740.hg.1	NM_001098268.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1300009740.hg.1	NM_002312.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1300009740.hg.1	NM_002312.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1300009740.hg.1	NM_002312.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1300009740.hg.1	NM_002312.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1300009740.hg.1	NM_002312.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1300009740.hg.1	NM_002312.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1300009740.hg.1	NM_206937.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1300009740.hg.1	NM_206937.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1300009740.hg.1	NM_206937.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1300009740.hg.1	NM_206937.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1300009740.hg.1	NM_206937.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1300009740.hg.1	NM_206937.1	Refseq
Affymetrix Human Clariom D Assay	PSR1300164996.hg.1	ENST00000356922.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1300164996.hg.1	ENST00000611712.4	Ensembl
Affymetrix Human Clariom D Assay	PSR1300164996.hg.1	NM_002312.3	Refseq
Affymetrix Human Clariom D Assay	PSR1300164996.hg.1	ENST00000356922.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1300164996.hg.1	ENST00000611712.4	Ensembl
Affymetrix Human Clariom D Assay	PSR1300164996.hg.1	NM_002312.3	Refseq
Affymetrix Human Clariom D Assay	PSR1300164996.hg.1	TC1300009740.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	TC1300009740.hg.1	ENST00000356922.5	Ensembl
Affymetrix Human Clariom D Assay	TC1300009740.hg.1	ENST00000356922.5	Ensembl
Affymetrix Human Clariom D Assay	TC1300009740.hg.1	ENST00000356922.5	Ensembl
Affymetrix Human Clariom D Assay	TC1300009740.hg.1	ENST00000356922.5	Ensembl
Affymetrix Human Clariom D Assay	TC1300009740.hg.1	ENST00000356922.5	Ensembl
Affymetrix Human Clariom D Assay	TC1300009740.hg.1	ENST00000356922.5	Ensembl
Affymetrix Human Clariom D Assay	TC1300009740.hg.1	ENST00000405925.2	Ensembl
Affymetrix Human Clariom D Assay	TC1300009740.hg.1	ENST00000405925.2	Ensembl
Affymetrix Human Clariom D Assay	TC1300009740.hg.1	ENST00000405925.2	Ensembl
Affymetrix Human Clariom D Assay	TC1300009740.hg.1	ENST00000405925.2	Ensembl
Affymetrix Human Clariom D Assay	TC1300009740.hg.1	ENST00000405925.2	Ensembl
Affymetrix Human Clariom D Assay	TC1300009740.hg.1	ENST00000442234.5	Ensembl
Affymetrix Human Clariom D Assay	TC1300009740.hg.1	ENST00000442234.5	Ensembl
Affymetrix Human Clariom D Assay	TC1300009740.hg.1	ENST00000442234.5	Ensembl
Affymetrix Human Clariom D Assay	TC1300009740.hg.1	ENST00000442234.5	Ensembl
Affymetrix Human Clariom D Assay	TC1300009740.hg.1	ENST00000442234.5	Ensembl
Affymetrix Human Clariom D Assay	TC1300009740.hg.1	ENST00000442234.5	Ensembl
Affymetrix Human Clariom D Assay	TC1300009740.hg.1	ENST00000611712.4	Ensembl
Affymetrix Human Clariom D Assay	TC1300009740.hg.1	ENST00000611712.4	Ensembl
Affymetrix Human Clariom D Assay	TC1300009740.hg.1	ENST00000611712.4	Ensembl
Affymetrix Human Clariom D Assay	TC1300009740.hg.1	ENST00000611712.4	Ensembl
Affymetrix Human Clariom D Assay	TC1300009740.hg.1	ENST00000611712.4	Ensembl
Affymetrix Human Clariom D Assay	TC1300009740.hg.1	ENST00000611712.4	Ensembl
Affymetrix Human Clariom D Assay	TC1300009740.hg.1	ENST00000611712.4	Ensembl
Affymetrix Human Clariom D Assay	TC1300009740.hg.1	ENST00000611712.4	Ensembl
Affymetrix Human Clariom D Assay	TC1300009740.hg.1	ENST00000614526.1	Ensembl
Affymetrix Human Clariom D Assay	TC1300009740.hg.1	ENST00000614526.1	Ensembl
Affymetrix Human Clariom D Assay	TC1300009740.hg.1	ENST00000614526.1	Ensembl
Affymetrix Human Clariom D Assay	TC1300009740.hg.1	ENST00000614526.1	Ensembl
Affymetrix Human Clariom D Assay	TC1300009740.hg.1	NM_001098268.1	Refseq
Affymetrix Human Clariom D Assay	TC1300009740.hg.1	NM_001098268.1	Refseq
Affymetrix Human Clariom D Assay	TC1300009740.hg.1	NM_001098268.1	Refseq
Affymetrix Human Clariom D Assay	TC1300009740.hg.1	NM_001098268.1	Refseq
Affymetrix Human Clariom D Assay	TC1300009740.hg.1	NM_001098268.1	Refseq
Affymetrix Human Clariom D Assay	TC1300009740.hg.1	NM_002312.3	Refseq
Affymetrix Human Clariom D Assay	TC1300009740.hg.1	NM_002312.3	Refseq
Affymetrix Human Clariom D Assay	TC1300009740.hg.1	NM_002312.3	Refseq
Affymetrix Human Clariom D Assay	TC1300009740.hg.1	NM_002312.3	Refseq
Affymetrix Human Clariom D Assay	TC1300009740.hg.1	NM_002312.3	Refseq
Affymetrix Human Clariom D Assay	TC1300009740.hg.1	NM_002312.3	Refseq
Affymetrix Human Clariom D Assay	TC1300009740.hg.1	NM_206937.1	Refseq
Affymetrix Human Clariom D Assay	TC1300009740.hg.1	NM_206937.1	Refseq
Affymetrix Human Clariom D Assay	TC1300009740.hg.1	NM_206937.1	Refseq
Affymetrix Human Clariom D Assay	TC1300009740.hg.1	NM_206937.1	Refseq
Affymetrix Human Clariom D Assay	TC1300009740.hg.1	NM_206937.1	Refseq
Affymetrix Human Clariom D Assay	TC1300009740.hg.1	NM_206937.1	Refseq

Array Name	Probe IDs	Targets	Target Type
ABI Human Genome Survey Microarray Version 2.0	142541	-	-