Hs00936115_m1

• Gene Symbol: HACE1
• Gene Name: HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1
• Gene Aliases: SPPRS
• Chromosome Location: Chr.6: 104682670 - 104859919 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: HACE1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001321080.1	NP_001308009.1	18 - 19	2353		88
	NM_001321083.1	NP_001308012.1	19 - 20	2300		88
	NM_001321084.1	NP_001308013.1	18 - 19	2217		88
	NM_020771.3	NP_065822.2	19 - 20	2485		88
	NR_104424.1		21 - 22	2684		88
	XM_017011113.1	XP_016866602.1	19 - 20	2352		88
	XM_017011114.1	XP_016866603.1	18 - 19	2171		88
	XM_017011115.1	XP_016866604.1	18 - 19	2327		88
	XM_017011116.1	XP_016866605.1	18 - 19	2382		88
	XM_017011118.1	XP_016866607.1	16 - 17	1905		88
	XM_017011119.1	XP_016866608.1	18 - 19	2188		88
	XM_017011120.1	XP_016866609.1	17 - 18	2303		88
	XM_017011121.1	XP_016866610.1	17 - 18	2270		88
	XM_017011122.1	XP_016866611.1	18 - 19	2022		88
GenBank mRNA	AB037741.1	-	8 - 9	3232		88
	AK291760.1	-	19 - 20	2410		88
	AK292683.1	-	8 - 9	999		88
	AK294164.1	-	7 - 8	750		88
	AK300314.1	-	8 - 9	926		88
	AK316091.1	-	6 - 7	712		88
	AL834202.1	-	6 - 7	722		88
	BC034982.2	-	19 - 20	2449	4838835	88

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0600012702.hg.1
This assay targets the same location as HTA transcript cluster(s) TC06001972.hg.1

• Set Membership: Ambion siRNA available, Amplicon length between 86 and 100, Mammalian Gene Collection, Homo sapiens, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene HACE1

Panther Classification:

Molecular Function -

ubiquitin-protein ligase

Gene Ontology Categories:

Process(es)

transcription, DNA-templated
regulation of transcription, DNA-templated
Golgi organization
cell cycle
protein ubiquitination
Rac protein signal transduction
regulation of cell migration
protein ubiquitination involved in ubiquitin-dependent protein catabolic process
membrane fusion
protein K48-linked ubiquitination

Function(s)

ubiquitin-protein transferase activity
protein binding
ligase activity
Rab GTPase binding
Rac GTPase binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR06024454.hg.1	TC06001972.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR06024454.hg.1	ENST00000262903.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR06024454.hg.1	ENST00000369125.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR06024454.hg.1	ENST00000517995.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR06024454.hg.1	NM_020771.3	Refseq
Affymetrix Human Clariom D Assay	PSR0600187574.hg.1	ENST00000262903.8	Ensembl
Affymetrix Human Clariom D Assay	PSR0600187574.hg.1	ENST00000369125.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0600187574.hg.1	ENST00000369127.8	Ensembl
Affymetrix Human Clariom D Assay	PSR0600187574.hg.1	ENST00000416605.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0600187574.hg.1	ENST00000517424.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0600187574.hg.1	ENST00000517995.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0600187574.hg.1	NM_020771.3	Refseq
Affymetrix Human Clariom D Assay	PSR0600187574.hg.1	NR_104424.1	Refseq
Affymetrix Human Clariom D Assay	PSR0600187574.hg.1	ENST00000262903.8	Ensembl
Affymetrix Human Clariom D Assay	PSR0600187574.hg.1	ENST00000369125.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0600187574.hg.1	ENST00000369127.8	Ensembl
Affymetrix Human Clariom D Assay	PSR0600187574.hg.1	ENST00000416605.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0600187574.hg.1	ENST00000517424.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0600187574.hg.1	ENST00000517995.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0600187574.hg.1	NM_020771.3	Refseq
Affymetrix Human Clariom D Assay	PSR0600187574.hg.1	NR_104424.1	Refseq
Affymetrix Human Clariom D Assay	PSR0600187574.hg.1	TC0600012702.hg.1	Clariom D TC