Hs00936358_m1

• Gene Symbol: LINC00652
• Gene Name: long intergenic non-protein coding RNA 652
• Gene Aliases: HSPC072
• Chromosome Location: Chr.20: 18787971 - 18794584 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: LINC00652
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_026883.1		2 - 3	557		95
	NR_026884.1		1 - 2	319		95
GenBank mRNA	AK094606.1	-	1 - 2	317		95
	BC029555.1	-	1 - 2	329		95
	BC102038.1	-	2 - 3	153		95
	BC102039.1	-	2 - 3	153		95
	BC102040.1	-	1 - 2	154		95
	DA760399.1	-	1 - 2	319		95

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	DA295414.1	-	1 - 2	317		Chr. 20 - 18788709 - 18793980 [-] on Build GRCh38	95
GenBankmRNA	DA723630.1	-	1 - 2	317		Chr. 20 - 18788829 - 18793980 [-] on Build GRCh38	95
GenBankmRNA	DA726931.1	-	1 - 2	318		Chr. 20 - 18788793 - 18793980 [-] on Build GRCh38	95
GenBankmRNA	DB090107.1	-	1 - 2	313		Chr. 20 - 18788801 - 18793976 [-] on Build GRCh38	95
GenBankmRNA	HY132382.1	-	1 - 2	322		Chr. 20 - 18789574 - 18793984 [-] on Build GRCh38	95
GenBankmRNA	DA154930.1	-	1 - 2	317		Chr. 20 - 18788876 - 18793980 [-] on Build GRCh38	95
GenBankmRNA	BG709635.1	-		313		Chr. - - [-] on Build	95
GenBankmRNA	BI603968.1	-	2 - 3	313		Chr. 20 - 18788577 - 18794335 [-] on Build GRCh38	95
GenBankmRNA	DA756820.1	-	1 - 2	305		Chr. 20 - 18788730 - 18793968 [-] on Build GRCh38	95
GenBankmRNA	DA223059.1	-	1 - 2	314		Chr. 20 - 18788707 - 18793976 [-] on Build GRCh38	95
GenBankmRNA	DB093418.1	-	1 - 2	75		Chr. 20 - 18788488 - 18793738 [-] on Build GRCh38	95
GenBankmRNA	DA209553.1	-	1 - 2	284		Chr. 20 - 18788690 - 18793947 [-] on Build GRCh38	95
GenBankmRNA	DB073960.1	-	1 - 2	317		Chr. 20 - 18788759 - 18793980 [-] on Build GRCh38	95
GenBankmRNA	BG715712.1	-	1 - 2	334		Chr. 20 - 18788608 - 18793993 [-] on Build GRCh38	95
GenBankmRNA	BG706914.1	-	2 - 3	311		Chr. 20 - 18788592 - 18794335 [-] on Build GRCh38	95

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	D-tyrosyl-tRNA deacylase 1	DTD1	C20orf88, DUE-B, DUEB, HARS2, pqn-68	-25.7kb	Anti-sense	Chr. 20 - 18587893 - 18763917 on NCBI Build GRCh38
Downstream	uncharacterized LOC100270804	LOC100270804		69.0	Anti-sense	Chr. 20 - 18794049 - 18796065 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC2000008545.hg.1
This assay targets the same location as HTA transcript cluster(s) TC20000672.hg.1

• Set Membership: Amplicon length between 86 and 100, Mammalian Gene Collection, Homo sapiens, 1700, Probe spans exons

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	TC2000008545.hg.1	ENST00000412553.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000008545.hg.1	ENST00000412553.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000008545.hg.1	ENST00000412553.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000008545.hg.1	ENST00000412553.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000008545.hg.1	ENST00000412553.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000008545.hg.1	ENST00000412553.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000008545.hg.1	ENST00000412553.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000008545.hg.1	ENST00000412553.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000008545.hg.1	ENST00000412553.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000008545.hg.1	ENST00000412553.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000008545.hg.1	ENST00000412553.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000008545.hg.1	ENST00000412553.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000008545.hg.1	ENST00000412553.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000008545.hg.1	ENST00000412553.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000008545.hg.1	ENST00000412553.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000008545.hg.1	ENST00000412553.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000008545.hg.1	ENST00000412553.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000008545.hg.1	ENST00000412553.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000008545.hg.1	ENST00000412553.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000008545.hg.1	ENST00000454749.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000008545.hg.1	ENST00000454749.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000008545.hg.1	ENST00000454749.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000008545.hg.1	ENST00000454749.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000008545.hg.1	ENST00000454749.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000008545.hg.1	ENST00000455340.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000008545.hg.1	ENST00000455340.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000008545.hg.1	ENST00000455340.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000008545.hg.1	ENST00000455340.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000008545.hg.1	ENST00000455340.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000008545.hg.1	ENST00000455340.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000008545.hg.1	ENST00000455340.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000008545.hg.1	ENST00000455340.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000008545.hg.1	ENST00000455340.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000008545.hg.1	ENST00000455340.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000008545.hg.1	ENST00000455340.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000008545.hg.1	ENST00000455340.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000008545.hg.1	NR_026883.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2000008545.hg.1	NR_026883.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2000008545.hg.1	NR_026883.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2000008545.hg.1	NR_026883.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2000008545.hg.1	NR_026883.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2000008545.hg.1	NR_026883.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2000008545.hg.1	NR_026883.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2000008545.hg.1	NR_026883.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2000008545.hg.1	NR_026883.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2000008545.hg.1	NR_026884.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2000008545.hg.1	NR_026884.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2000008545.hg.1	NR_026884.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2000008545.hg.1	NR_026884.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2000008545.hg.1	NR_026884.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2000008545.hg.1	NR_026884.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2000008545.hg.1	NR_026884.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2000008545.hg.1	NR_026884.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR20009416.hg.1	ENST00000412553.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR20009416.hg.1	NR_026884.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR20009416.hg.1	TC20000672.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR20009413.hg.1	ENST00000412553.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR20009413.hg.1	NR_026883.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR20009413.hg.1	NR_026884.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR20009413.hg.1	TC20000672.hg.1	HTA TC
Affymetrix Human Clariom D Assay	TC2000008545.hg.1	ENST00000412553.1	Ensembl
Affymetrix Human Clariom D Assay	TC2000008545.hg.1	ENST00000412553.1	Ensembl
Affymetrix Human Clariom D Assay	TC2000008545.hg.1	ENST00000412553.1	Ensembl
Affymetrix Human Clariom D Assay	TC2000008545.hg.1	ENST00000412553.1	Ensembl
Affymetrix Human Clariom D Assay	TC2000008545.hg.1	ENST00000412553.1	Ensembl
Affymetrix Human Clariom D Assay	TC2000008545.hg.1	ENST00000412553.1	Ensembl
Affymetrix Human Clariom D Assay	TC2000008545.hg.1	ENST00000412553.1	Ensembl
Affymetrix Human Clariom D Assay	TC2000008545.hg.1	ENST00000412553.1	Ensembl
Affymetrix Human Clariom D Assay	TC2000008545.hg.1	ENST00000412553.1	Ensembl
Affymetrix Human Clariom D Assay	TC2000008545.hg.1	ENST00000412553.1	Ensembl
Affymetrix Human Clariom D Assay	TC2000008545.hg.1	ENST00000412553.1	Ensembl
Affymetrix Human Clariom D Assay	TC2000008545.hg.1	ENST00000412553.1	Ensembl
Affymetrix Human Clariom D Assay	TC2000008545.hg.1	ENST00000412553.1	Ensembl
Affymetrix Human Clariom D Assay	TC2000008545.hg.1	ENST00000412553.1	Ensembl
Affymetrix Human Clariom D Assay	TC2000008545.hg.1	ENST00000412553.1	Ensembl
Affymetrix Human Clariom D Assay	TC2000008545.hg.1	ENST00000412553.1	Ensembl
Affymetrix Human Clariom D Assay	TC2000008545.hg.1	ENST00000412553.1	Ensembl
Affymetrix Human Clariom D Assay	TC2000008545.hg.1	ENST00000412553.1	Ensembl
Affymetrix Human Clariom D Assay	TC2000008545.hg.1	ENST00000412553.1	Ensembl
Affymetrix Human Clariom D Assay	TC2000008545.hg.1	ENST00000454749.1	Ensembl
Affymetrix Human Clariom D Assay	TC2000008545.hg.1	ENST00000454749.1	Ensembl
Affymetrix Human Clariom D Assay	TC2000008545.hg.1	ENST00000454749.1	Ensembl
Affymetrix Human Clariom D Assay	TC2000008545.hg.1	ENST00000454749.1	Ensembl
Affymetrix Human Clariom D Assay	TC2000008545.hg.1	ENST00000454749.1	Ensembl
Affymetrix Human Clariom D Assay	TC2000008545.hg.1	ENST00000455340.1	Ensembl
Affymetrix Human Clariom D Assay	TC2000008545.hg.1	ENST00000455340.1	Ensembl
Affymetrix Human Clariom D Assay	TC2000008545.hg.1	ENST00000455340.1	Ensembl
Affymetrix Human Clariom D Assay	TC2000008545.hg.1	ENST00000455340.1	Ensembl
Affymetrix Human Clariom D Assay	TC2000008545.hg.1	ENST00000455340.1	Ensembl
Affymetrix Human Clariom D Assay	TC2000008545.hg.1	ENST00000455340.1	Ensembl
Affymetrix Human Clariom D Assay	TC2000008545.hg.1	ENST00000455340.1	Ensembl
Affymetrix Human Clariom D Assay	TC2000008545.hg.1	ENST00000455340.1	Ensembl
Affymetrix Human Clariom D Assay	TC2000008545.hg.1	ENST00000455340.1	Ensembl
Affymetrix Human Clariom D Assay	TC2000008545.hg.1	ENST00000455340.1	Ensembl
Affymetrix Human Clariom D Assay	TC2000008545.hg.1	ENST00000455340.1	Ensembl
Affymetrix Human Clariom D Assay	TC2000008545.hg.1	ENST00000455340.1	Ensembl
Affymetrix Human Clariom D Assay	TC2000008545.hg.1	NR_026883.1	Refseq
Affymetrix Human Clariom D Assay	TC2000008545.hg.1	NR_026883.1	Refseq
Affymetrix Human Clariom D Assay	TC2000008545.hg.1	NR_026883.1	Refseq
Affymetrix Human Clariom D Assay	TC2000008545.hg.1	NR_026883.1	Refseq
Affymetrix Human Clariom D Assay	TC2000008545.hg.1	NR_026883.1	Refseq
Affymetrix Human Clariom D Assay	TC2000008545.hg.1	NR_026883.1	Refseq
Affymetrix Human Clariom D Assay	TC2000008545.hg.1	NR_026883.1	Refseq
Affymetrix Human Clariom D Assay	TC2000008545.hg.1	NR_026883.1	Refseq
Affymetrix Human Clariom D Assay	TC2000008545.hg.1	NR_026883.1	Refseq
Affymetrix Human Clariom D Assay	TC2000008545.hg.1	NR_026884.1	Refseq
Affymetrix Human Clariom D Assay	TC2000008545.hg.1	NR_026884.1	Refseq
Affymetrix Human Clariom D Assay	TC2000008545.hg.1	NR_026884.1	Refseq
Affymetrix Human Clariom D Assay	TC2000008545.hg.1	NR_026884.1	Refseq
Affymetrix Human Clariom D Assay	TC2000008545.hg.1	NR_026884.1	Refseq
Affymetrix Human Clariom D Assay	TC2000008545.hg.1	NR_026884.1	Refseq
Affymetrix Human Clariom D Assay	TC2000008545.hg.1	NR_026884.1	Refseq
Affymetrix Human Clariom D Assay	TC2000008545.hg.1	NR_026884.1	Refseq
Affymetrix Human Clariom D Assay	PSR2000159990.hg.1	ENST00000412553.1	Ensembl
Affymetrix Human Clariom D Assay	PSR2000159990.hg.1	ENST00000412553.1	Ensembl
Affymetrix Human Clariom D Assay	PSR2000159990.hg.1	NR_026884.1	Refseq
Affymetrix Human Clariom D Assay	PSR2000159990.hg.1	TC2000008545.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR2000159990.hg.1	ENST00000412553.1	Ensembl
Affymetrix Human Clariom D Assay	PSR2000159990.hg.1	ENST00000412553.1	Ensembl
Affymetrix Human Clariom D Assay	PSR2000159990.hg.1	NR_026884.1	Refseq
Affymetrix Human Clariom D Assay	PSR2000159987.hg.1	ENST00000412553.1	Ensembl
Affymetrix Human Clariom D Assay	PSR2000159987.hg.1	ENST00000412553.1	Ensembl
Affymetrix Human Clariom D Assay	PSR2000159987.hg.1	ENST00000454749.1	Ensembl
Affymetrix Human Clariom D Assay	PSR2000159987.hg.1	ENST00000455340.1	Ensembl
Affymetrix Human Clariom D Assay	PSR2000159987.hg.1	ENST00000455340.1	Ensembl
Affymetrix Human Clariom D Assay	PSR2000159987.hg.1	NR_026883.1	Refseq
Affymetrix Human Clariom D Assay	PSR2000159987.hg.1	NR_026884.1	Refseq
Affymetrix Human Clariom D Assay	PSR2000159987.hg.1	TC2000008545.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR2000159987.hg.1	ENST00000412553.1	Ensembl
Affymetrix Human Clariom D Assay	PSR2000159987.hg.1	ENST00000412553.1	Ensembl
Affymetrix Human Clariom D Assay	PSR2000159987.hg.1	ENST00000454749.1	Ensembl
Affymetrix Human Clariom D Assay	PSR2000159987.hg.1	ENST00000455340.1	Ensembl
Affymetrix Human Clariom D Assay	PSR2000159987.hg.1	ENST00000455340.1	Ensembl
Affymetrix Human Clariom D Assay	PSR2000159987.hg.1	NR_026883.1	Refseq
Affymetrix Human Clariom D Assay	PSR2000159987.hg.1	NR_026884.1	Refseq

Array Name	Probe IDs	Targets	Target Type
ABI Human Genome Survey Microarray Version 2.0	127893	-	-