Hs00939897_g1

• Gene Symbol: F11R
• Gene Name: F11 receptor
• Gene Aliases: CD321, JAM, JAM1, JAMA, JCAM, KAT, PAM-1
• Chromosome Location: Chr.1: 160995211 - 161021343 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: F11R
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_016946.4	NP_058642.1	8 - 9	1085		63
GenBank mRNA	AF154005.1	-	8 - 9	757		63
	AF172398.2	-	8 - 9	961		63
	AF207907.1	-	8 - 9	830		63
	AK026665.1	-	8 - 9	876		63
	AK075152.1	-	8 - 9	885		63
	AK299487.1	-	8 - 9	866		63
	AK304412.1	-	7 - 8	691		63
	AL136649.1	-	8 - 9	889		63
	AY358896.1	-	8 - 9	866		63
	BC001533.2	-	8 - 9	859	2990019	63
	BT020103.1	-	8 - 9	815		63
	CR533512.1	-	8 - 9	815		63

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0100018519.hg.1
This assay targets the same location as HTA transcript cluster(s) TC01003412.hg.1

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, Mammalian Gene Collection, Detect Genomic DNA, Homo sapiens, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene F11R

Gene Ontology Categories:

Process(es)

regulation of cytokine production
inflammatory response
transforming growth factor beta receptor signaling pathway
response to radiation
extracellular matrix organization
actomyosin structure organization
negative regulation of GTPase activity
positive regulation of GTPase activity
positive regulation of blood pressure
viral entry into host cell
intestinal absorption
leukocyte migration
bicellular tight junction assembly
establishment of protein localization to plasma membrane
establishment of endothelial intestinal barrier
regulation of membrane permeability
cell-cell adhesion
regulation of actin cytoskeleton reorganization

Function(s)

virus receptor activity
protein binding
PDZ domain binding
cadherin binding involved in cell-cell adhesion

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR01053354.hg.1	TC01003412.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR01053354.hg.1	ENST00000289779.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR01053354.hg.1	ENST00000335772.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR01053354.hg.1	ENST00000368026.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR01053354.hg.1	ENST00000436182.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR01053354.hg.1	ENST00000537746.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR01053354.hg.1	NM_016946.5	Refseq
Affymetrix Human Clariom D Assay	PSR0100243905.hg.1	ENST00000368026.10	Ensembl
Affymetrix Human Clariom D Assay	PSR0100243905.hg.1	ENST00000537746.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0100243905.hg.1	ENST00000621309.4	Ensembl
Affymetrix Human Clariom D Assay	PSR0100243905.hg.1	NM_016946.5	Refseq
Affymetrix Human Clariom D Assay	PSR0100243905.hg.1	ENST00000368026.10	Ensembl
Affymetrix Human Clariom D Assay	PSR0100243905.hg.1	ENST00000537746.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0100243905.hg.1	ENST00000621309.4	Ensembl
Affymetrix Human Clariom D Assay	PSR0100243905.hg.1	NM_016946.5	Refseq
Affymetrix Human Clariom D Assay	PSR0100243905.hg.1	TC0100018519.hg.1	Clariom D TC