Hs00943142_m1

• Gene Symbol: PPEF1
• Gene Name: protein phosphatase with EF-hand domain 1
• Gene Aliases: PP7, PPEF, PPP7C, PPP7CA
• Chromosome Location: Chr.X: 18675909 - 18827921 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: PPEF1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_006240.2	NP_006231.2	11 - 12	1243		83
	NM_152224.1	NP_689410.1	11 - 12	1243		83
	NM_152226.1	NP_689412.1	11 - 12	1243		83
	XM_005274553.2	XP_005274610.1	13 - 14	1570		83
	XM_017029612.1	XP_016885101.1	11 - 12	1381		83
GenBank mRNA	AF023455.1	-	8 - 9	844		83
	AF027977.1	-	8 - 9	996		83
	AK290463.1	-	8 - 9	898		83
	AK292235.1	-	11 - 12	1242		83
	AK295504.1	-	7 - 8	733		83
	AK300815.1	-	7 - 8	761		83
	AK315809.1	-	8 - 9	859		83
	BC036026.1	-	11 - 12	1242	5273322	83
	X97867.1	-	11 - 12	1245		83

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0X00006725.hg.1
This assay targets the same location as HTA transcript cluster(s) TC0X000090.hg.1

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, Protein Phosphatase, Mammalian Gene Collection, Homo sapiens, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene PPEF1

Panther Classification:

Molecular Function -

protein phosphatase

Gene Ontology Categories:

Process(es)

protein dephosphorylation
regulation of rhodopsin mediated signaling pathway
detection of stimulus involved in sensory perception

Function(s)

protein serine/threonine phosphatase activity
iron ion binding
calcium ion binding
protein binding
manganese ion binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR0X001211.hg.1	TC0X000090.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR0X001211.hg.1	ENST00000349874.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR0X001211.hg.1	ENST00000359763.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR0X001211.hg.1	ENST00000361511.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR0X001211.hg.1	ENST00000543630.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR0X001211.hg.1	ENST00000544635.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR0X001211.hg.1	NM_006240.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR0X001211.hg.1	NM_152224.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR0X001211.hg.1	NM_152226.1	Refseq
Affymetrix Human Clariom D Assay	PSR0X00146107.hg.1	ENST00000349874.9	Ensembl
Affymetrix Human Clariom D Assay	PSR0X00146107.hg.1	ENST00000361511.8	Ensembl
Affymetrix Human Clariom D Assay	PSR0X00146107.hg.1	ENST00000379962.3	Ensembl
Affymetrix Human Clariom D Assay	PSR0X00146107.hg.1	ENST00000496075.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0X00146107.hg.1	NM_006240.2	Refseq
Affymetrix Human Clariom D Assay	PSR0X00146107.hg.1	NM_152224.1	Refseq
Affymetrix Human Clariom D Assay	PSR0X00146107.hg.1	NM_152226.1	Refseq
Affymetrix Human Clariom D Assay	PSR0X00146107.hg.1	ENST00000349874.9	Ensembl
Affymetrix Human Clariom D Assay	PSR0X00146107.hg.1	ENST00000361511.8	Ensembl
Affymetrix Human Clariom D Assay	PSR0X00146107.hg.1	ENST00000379962.3	Ensembl
Affymetrix Human Clariom D Assay	PSR0X00146107.hg.1	ENST00000496075.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0X00146107.hg.1	NM_006240.2	Refseq
Affymetrix Human Clariom D Assay	PSR0X00146107.hg.1	NM_152224.1	Refseq
Affymetrix Human Clariom D Assay	PSR0X00146107.hg.1	NM_152226.1	Refseq
Affymetrix Human Clariom D Assay	PSR0X00146107.hg.1	TC0X00006725.hg.1	Clariom D TC