Hs00943145_m1

• Gene Symbol: PPEF1
• Gene Name: protein phosphatase with EF-hand domain 1
• Gene Aliases: PP7, PPEF, PPP7C, PPP7CA
• Chromosome Location: Chr.X: 18675909 - 18827921 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: PPEF1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_006240.2	NP_006231.2	14 - 15	1728		87
	NM_152224.1	NP_689410.1	14 - 15	1644		87
	XM_005274553.2	XP_005274610.1	16 - 17	2055		87
	XM_017029612.1	XP_016885101.1	14 - 15	1866		87
GenBank mRNA	AF023455.1	-	11 - 12	1329		87
	AF027977.1	-	11 - 12	1481		87
	AK290463.1	-	11 - 12	1383		87
	AK292235.1	-	14 - 15	1727		87
	AK295504.1	-	10 - 11	1218		87
	AK300815.1	-	10 - 11	1246		87
	AK315809.1	-	11 - 12	1344		87
	BC036026.1	-	14 - 15	1727	5273322	87
	X97867.1	-	14 - 15	1730		87

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0X00006725.hg.1
This assay targets the same location as HTA transcript cluster(s) TC0X000090.hg.1

• Set Membership: Ambion siRNA available, Amplicon length between 86 and 100, Protein Phosphatase, Mammalian Gene Collection, Homo sapiens, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene PPEF1

Panther Classification:

Molecular Function -

protein phosphatase

Gene Ontology Categories:

Process(es)

protein dephosphorylation
regulation of rhodopsin mediated signaling pathway
detection of stimulus involved in sensory perception

Function(s)

protein serine/threonine phosphatase activity
iron ion binding
calcium ion binding
protein binding
manganese ion binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR0X001217.hg.1	TC0X000090.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR0X001217.hg.1	ENST00000349874.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR0X001217.hg.1	ENST00000359763.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR0X001217.hg.1	ENST00000361511.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR0X001217.hg.1	ENST00000544635.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR0X001217.hg.1	NM_006240.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR0X001217.hg.1	NM_152224.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR0X001217.hg.1	NM_152226.1	Refseq
Affymetrix Human Clariom D Assay	PSR0X00146112.hg.1	ENST00000349874.9	Ensembl
Affymetrix Human Clariom D Assay	PSR0X00146112.hg.1	ENST00000361511.8	Ensembl
Affymetrix Human Clariom D Assay	PSR0X00146112.hg.1	ENST00000379962.3	Ensembl
Affymetrix Human Clariom D Assay	PSR0X00146112.hg.1	NM_006240.2	Refseq
Affymetrix Human Clariom D Assay	PSR0X00146112.hg.1	NM_152224.1	Refseq
Affymetrix Human Clariom D Assay	PSR0X00146112.hg.1	NM_152226.1	Refseq
Affymetrix Human Clariom D Assay	PSR0X00146112.hg.1	ENST00000349874.9	Ensembl
Affymetrix Human Clariom D Assay	PSR0X00146112.hg.1	ENST00000361511.8	Ensembl
Affymetrix Human Clariom D Assay	PSR0X00146112.hg.1	ENST00000379962.3	Ensembl
Affymetrix Human Clariom D Assay	PSR0X00146112.hg.1	NM_006240.2	Refseq
Affymetrix Human Clariom D Assay	PSR0X00146112.hg.1	NM_152224.1	Refseq
Affymetrix Human Clariom D Assay	PSR0X00146112.hg.1	NM_152226.1	Refseq
Affymetrix Human Clariom D Assay	PSR0X00146112.hg.1	TC0X00006725.hg.1	Clariom D TC