Hs00946954_m1

• Gene Symbol: VPS13A
• Gene Name: vacuolar protein sorting 13 homolog A
• Gene Aliases: CHAC, CHOREIN
• Chromosome Location: Chr.9: 77177353 - 77421537 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: VPS13A
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001018037.1	NP_001018047.1	30 - 31	3488		163
	NM_001018038.2	NP_001018048.1	31 - 32	3605		163
	NM_015186.3	NP_056001.1	31 - 32	3605		163
	NM_033305.2	NP_150648.2	31 - 32	3605		163
GenBank mRNA	AB054005.1	-	31 - 32	3516		163
	AF337532.1	-	31 - 32	3605		163
	AJ608769.1	-	30 - 31	3488		163
	AJ626859.1	-	31 - 32	3605		163
	AK124024.1	-	6 - 7	635		163

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0900007646.hg.1
This assay targets the same location as HTA transcript cluster(s) TC09000354.hg.1

• Set Membership: Ambion siRNA available, Amplicon length greater than or equal to 101, Homo sapiens, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene VPS13A

Panther Classification:

Molecular Function -

membrane traffic protein

Gene Ontology Categories:

Process(es)

protein targeting to vacuole
Golgi to endosome transport
autophagy
nervous system development
locomotory behavior
protein localization
social behavior
protein retention in Golgi apparatus

Function(s)

protein binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR09003781.hg.1	TC09000354.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR09003781.hg.1	ENST00000357409.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR09003781.hg.1	ENST00000360280.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR09003781.hg.1	ENST00000376634.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR09003781.hg.1	ENST00000376636.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR09003781.hg.1	ENST00000423463.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR09003781.hg.1	NM_001018037.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR09003781.hg.1	NM_001018038.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR09003781.hg.1	NM_015186.3	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR09003781.hg.1	NM_033305.2	Refseq
Affymetrix Human Clariom D Assay	PSR0900151650.hg.1	ENST00000357409.9	Ensembl
Affymetrix Human Clariom D Assay	PSR0900151650.hg.1	ENST00000360280.7	Ensembl
Affymetrix Human Clariom D Assay	PSR0900151650.hg.1	ENST00000376634.8	Ensembl
Affymetrix Human Clariom D Assay	PSR0900151650.hg.1	ENST00000376636.7	Ensembl
Affymetrix Human Clariom D Assay	PSR0900151650.hg.1	ENST00000423463.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0900151650.hg.1	NM_001018037.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900151650.hg.1	NM_001018038.2	Refseq
Affymetrix Human Clariom D Assay	PSR0900151650.hg.1	NM_015186.3	Refseq
Affymetrix Human Clariom D Assay	PSR0900151650.hg.1	NM_033305.2	Refseq
Affymetrix Human Clariom D Assay	PSR0900151650.hg.1	ENST00000357409.9	Ensembl
Affymetrix Human Clariom D Assay	PSR0900151650.hg.1	ENST00000360280.7	Ensembl
Affymetrix Human Clariom D Assay	PSR0900151650.hg.1	ENST00000376634.8	Ensembl
Affymetrix Human Clariom D Assay	PSR0900151650.hg.1	ENST00000376636.7	Ensembl
Affymetrix Human Clariom D Assay	PSR0900151650.hg.1	ENST00000423463.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0900151650.hg.1	NM_001018037.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900151650.hg.1	NM_001018038.2	Refseq
Affymetrix Human Clariom D Assay	PSR0900151650.hg.1	NM_015186.3	Refseq
Affymetrix Human Clariom D Assay	PSR0900151650.hg.1	NM_033305.2	Refseq
Affymetrix Human Clariom D Assay	PSR0900151650.hg.1	TC0900007646.hg.1	Clariom D TC