Hs00950876_m1

• Gene Symbol: ALKBH1
• Gene Name: alkB homolog 1, histone H2A dioxygenase
• Gene Aliases: ABH, ABH1, ALKBH, alkB, hABH
• Chromosome Location: Chr.14: 77672404 - 77708038 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: ALKBH1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_006020.2	NP_006011.2	2 - 3	298		76
GenBank mRNA	BC015024.1	-	2 - 3	263		76
	BC025787.1	-	2 - 3	298	5229152	76
	BX537699.1	-	2 - 3	308		76
	X91992.1	-	2 - 3	286		76

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC1400009791.hg.1
This assay targets the same location as HTA transcript cluster(s) TC14001349.hg.1

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, Mammalian Gene Collection, Homo sapiens, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene ALKBH1

Panther Classification:

Molecular Function -

DNA metabolism protein

Gene Ontology Categories:

Process(es)

in utero embryonic development
neuron migration
placenta development
DNA repair
DNA dealkylation involved in DNA repair
regulation of gene expression
neuron projection development
RNA repair
negative regulation of neuron apoptotic process
developmental growth
positive chemotaxis
oxidative demethylation
DNA demethylation

Function(s)

DNA-(apurinic or apyrimidinic site) lyase activity
ferrous iron binding
chemoattractant activity
methylcytosine dioxygenase activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR14015353.hg.1	ENST00000216489.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR14015353.hg.1	ENST00000554097.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR14015353.hg.1	NM_006020.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR14015353.hg.1	TC14001349.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	TC1400009791.hg.1	ENST00000216489.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1400009791.hg.1	ENST00000216489.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1400009791.hg.1	ENST00000216489.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1400009791.hg.1	ENST00000216489.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1400009791.hg.1	ENST00000216489.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1400009791.hg.1	ENST00000216489.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1400009791.hg.1	ENST00000216489.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1400009791.hg.1	ENST00000216489.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1400009791.hg.1	ENST00000216489.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1400009791.hg.1	ENST00000216489.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1400009791.hg.1	ENST00000216489.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1400009791.hg.1	ENST00000216489.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1400009791.hg.1	ENST00000554097.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1400009791.hg.1	ENST00000554097.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1400009791.hg.1	ENST00000554097.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1400009791.hg.1	ENST00000555100.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1400009791.hg.1	ENST00000555100.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1400009791.hg.1	ENST00000555100.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1400009791.hg.1	ENST00000555100.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1400009791.hg.1	ENST00000555100.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1400009791.hg.1	ENST00000555100.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1400009791.hg.1	ENST00000557057.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1400009791.hg.1	ENST00000557057.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1400009791.hg.1	ENST00000557057.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1400009791.hg.1	ENST00000557057.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1400009791.hg.1	ENST00000557057.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1400009791.hg.1	ENST00000557057.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1400009791.hg.1	ENST00000557057.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1400009791.hg.1	ENST00000557057.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1400009791.hg.1	ENST00000557057.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1400009791.hg.1	NM_006020.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1400009791.hg.1	NM_006020.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1400009791.hg.1	NM_006020.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1400009791.hg.1	NM_006020.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1400009791.hg.1	NM_006020.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1400009791.hg.1	NM_006020.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1400009791.hg.1	NM_006020.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1400009791.hg.1	NM_006020.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1400009791.hg.1	NM_006020.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1400009791.hg.1	NM_006020.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1400009791.hg.1	NM_006020.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1400009791.hg.1	NM_006020.2	Refseq
Affymetrix Human Clariom D Assay	PSR1400172317.hg.1	ENST00000216489.7	Ensembl
Affymetrix Human Clariom D Assay	PSR1400172317.hg.1	ENST00000554097.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1400172317.hg.1	NM_006020.2	Refseq
Affymetrix Human Clariom D Assay	PSR1400172317.hg.1	ENST00000216489.7	Ensembl
Affymetrix Human Clariom D Assay	PSR1400172317.hg.1	ENST00000554097.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1400172317.hg.1	NM_006020.2	Refseq
Affymetrix Human Clariom D Assay	PSR1400172317.hg.1	TC1400009791.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	TC1400009791.hg.1	ENST00000216489.7	Ensembl
Affymetrix Human Clariom D Assay	TC1400009791.hg.1	ENST00000216489.7	Ensembl
Affymetrix Human Clariom D Assay	TC1400009791.hg.1	ENST00000216489.7	Ensembl
Affymetrix Human Clariom D Assay	TC1400009791.hg.1	ENST00000216489.7	Ensembl
Affymetrix Human Clariom D Assay	TC1400009791.hg.1	ENST00000216489.7	Ensembl
Affymetrix Human Clariom D Assay	TC1400009791.hg.1	ENST00000216489.7	Ensembl
Affymetrix Human Clariom D Assay	TC1400009791.hg.1	ENST00000216489.7	Ensembl
Affymetrix Human Clariom D Assay	TC1400009791.hg.1	ENST00000216489.7	Ensembl
Affymetrix Human Clariom D Assay	TC1400009791.hg.1	ENST00000216489.7	Ensembl
Affymetrix Human Clariom D Assay	TC1400009791.hg.1	ENST00000216489.7	Ensembl
Affymetrix Human Clariom D Assay	TC1400009791.hg.1	ENST00000216489.7	Ensembl
Affymetrix Human Clariom D Assay	TC1400009791.hg.1	ENST00000216489.7	Ensembl
Affymetrix Human Clariom D Assay	TC1400009791.hg.1	ENST00000554097.1	Ensembl
Affymetrix Human Clariom D Assay	TC1400009791.hg.1	ENST00000554097.1	Ensembl
Affymetrix Human Clariom D Assay	TC1400009791.hg.1	ENST00000554097.1	Ensembl
Affymetrix Human Clariom D Assay	TC1400009791.hg.1	ENST00000555100.1	Ensembl
Affymetrix Human Clariom D Assay	TC1400009791.hg.1	ENST00000555100.1	Ensembl
Affymetrix Human Clariom D Assay	TC1400009791.hg.1	ENST00000555100.1	Ensembl
Affymetrix Human Clariom D Assay	TC1400009791.hg.1	ENST00000555100.1	Ensembl
Affymetrix Human Clariom D Assay	TC1400009791.hg.1	ENST00000555100.1	Ensembl
Affymetrix Human Clariom D Assay	TC1400009791.hg.1	ENST00000555100.1	Ensembl
Affymetrix Human Clariom D Assay	TC1400009791.hg.1	ENST00000557057.5	Ensembl
Affymetrix Human Clariom D Assay	TC1400009791.hg.1	ENST00000557057.5	Ensembl
Affymetrix Human Clariom D Assay	TC1400009791.hg.1	ENST00000557057.5	Ensembl
Affymetrix Human Clariom D Assay	TC1400009791.hg.1	ENST00000557057.5	Ensembl
Affymetrix Human Clariom D Assay	TC1400009791.hg.1	ENST00000557057.5	Ensembl
Affymetrix Human Clariom D Assay	TC1400009791.hg.1	ENST00000557057.5	Ensembl
Affymetrix Human Clariom D Assay	TC1400009791.hg.1	ENST00000557057.5	Ensembl
Affymetrix Human Clariom D Assay	TC1400009791.hg.1	ENST00000557057.5	Ensembl
Affymetrix Human Clariom D Assay	TC1400009791.hg.1	ENST00000557057.5	Ensembl
Affymetrix Human Clariom D Assay	TC1400009791.hg.1	NM_006020.2	Refseq
Affymetrix Human Clariom D Assay	TC1400009791.hg.1	NM_006020.2	Refseq
Affymetrix Human Clariom D Assay	TC1400009791.hg.1	NM_006020.2	Refseq
Affymetrix Human Clariom D Assay	TC1400009791.hg.1	NM_006020.2	Refseq
Affymetrix Human Clariom D Assay	TC1400009791.hg.1	NM_006020.2	Refseq
Affymetrix Human Clariom D Assay	TC1400009791.hg.1	NM_006020.2	Refseq
Affymetrix Human Clariom D Assay	TC1400009791.hg.1	NM_006020.2	Refseq
Affymetrix Human Clariom D Assay	TC1400009791.hg.1	NM_006020.2	Refseq
Affymetrix Human Clariom D Assay	TC1400009791.hg.1	NM_006020.2	Refseq
Affymetrix Human Clariom D Assay	TC1400009791.hg.1	NM_006020.2	Refseq
Affymetrix Human Clariom D Assay	TC1400009791.hg.1	NM_006020.2	Refseq
Affymetrix Human Clariom D Assay	TC1400009791.hg.1	NM_006020.2	Refseq