Hs00956096_m1

• Gene Symbol: PTPN12
• Gene Name: protein tyrosine phosphatase, non-receptor type 12
• Gene Aliases: PTP-PEST, PTPG1
• Chromosome Location: Chr.7: 77537160 - 77640071 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: PTPN12
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001131008.1	NP_001124480.1	5 - 6	399		120
	NM_001131009.1	NP_001124481.1	4 - 5	303		120
	NM_002835.3	NP_002826.3	5 - 6	517		120
	XM_005250518.2	XP_005250575.1	3 - 4	269		120
	XM_006716073.3	XP_006716136.1	4 - 5	717		120
	XM_011516444.1	XP_011514746.1	5 - 6	484		120
	XM_017012474.1	XP_016867963.1	3 - 4	233		120
GenBank mRNA	AB209524.1	-	5 - 6	508		120
	AK289573.1	-	5 - 6	461		120
	AK296764.1	-	4 - 5	269		120
	AK303602.1	-	5 - 6	399		120
	AK314236.1	-	5 - 6	484		120
	BC050008.1	-	6 - 7	702	5268732	120
	CN395133.1	-	5 - 6	520		120
	D13380.1	-	5 - 6	445		120
	M93425.1	-	5 - 6	455		120

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0700008141.hg
This assay targets the same location as HTA transcript cluster(s) TC07000495.hg

Additional Information:

This assay is in the 5'UTR region of the XM_011516444.1 transcripts.

• Set Membership: Ambion siRNA available, Amplicon length greater than or equal to 101, Protein Phosphatase, Mammalian Gene Collection, Homo sapiens, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene PTPN12

Gene Ontology Categories:

Process(es)

protein dephosphorylation
peptidyl-tyrosine dephosphorylation
regulation of epidermal growth factor receptor signaling pathway
tissue regeneration
cellular response to epidermal growth factor stimulus

Function(s)

phosphoprotein phosphatase activity
non-membrane spanning protein tyrosine phosphatase activity
protein binding
SH3 domain binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR07007000.hg.1	TC07000495.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR07007000.hg.1	ENST00000248594.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR07007000.hg.1	ENST00000415482.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR07007000.hg.1	ENST00000435495.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR07007000.hg.1	ENST00000543073.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR07007000.hg.1	NM_001131008.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR07007000.hg.1	NM_001131009.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR07007000.hg.1	NM_002835.3	Refseq
Affymetrix Human Clariom D Assay	PSR0700156529.hg.1	ENST00000248594.10	Ensembl
Affymetrix Human Clariom D Assay	PSR0700156529.hg.1	ENST00000415482.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0700156529.hg.1	ENST00000418110.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0700156529.hg.1	ENST00000433369.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0700156529.hg.1	ENST00000435495.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0700156529.hg.1	ENST00000447995.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0700156529.hg.1	ENST00000481154.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0700156529.hg.1	ENST00000494248.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0700156529.hg.1	NM_001131008.1	Refseq
Affymetrix Human Clariom D Assay	PSR0700156529.hg.1	NM_001131009.1	Refseq
Affymetrix Human Clariom D Assay	PSR0700156529.hg.1	NM_002835.3	Refseq
Affymetrix Human Clariom D Assay	PSR0700156529.hg.1	ENST00000248594.10	Ensembl
Affymetrix Human Clariom D Assay	PSR0700156529.hg.1	ENST00000415482.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0700156529.hg.1	ENST00000418110.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0700156529.hg.1	ENST00000433369.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0700156529.hg.1	ENST00000435495.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0700156529.hg.1	ENST00000447995.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0700156529.hg.1	ENST00000481154.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0700156529.hg.1	ENST00000494248.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0700156529.hg.1	NM_001131008.1	Refseq
Affymetrix Human Clariom D Assay	PSR0700156529.hg.1	NM_001131009.1	Refseq
Affymetrix Human Clariom D Assay	PSR0700156529.hg.1	NM_002835.3	Refseq
Affymetrix Human Clariom D Assay	PSR0700156529.hg.1	TC0700008141.hg.1	Clariom D TC