Hs00957416_m1

• Gene Symbol: BCAS1
• Gene Name: breast carcinoma amplified sequence 1
• Gene Aliases: AIBC1, NABC1
• Chromosome Location: Chr.20: 53943538 - 54070765 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: BCAS1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001316361.2	NP_001303290.1	5 - 6	1226		129
	NM_001323347.1	NP_001310276.1	5 - 6	939		129
	NM_003657.3	NP_003648.2	5 - 6	1226		129
	XM_005260587.2	XP_005260644.1	5 - 6	1006		264
	XM_005260589.2	XP_005260646.1	5 - 6	1006		264
	XM_005260590.2	XP_005260647.1	5 - 6	1006		264
	XM_005260591.2	XP_005260648.1	5 - 6	1006		264
	XM_005260593.2	XP_005260650.1	5 - 6	1006		129
	XM_005260594.2	XP_005260651.1	5 - 6	1006		264
	XM_005260595.2	XP_005260652.1	5 - 6	1006		264
	XM_011529090.2	XP_011527392.1	5 - 6	934		264
	XM_011529091.2	XP_011527393.1	5 - 6	1006		264
	XM_017028110.1	XP_016883599.1	5 - 6	1006		129
	XM_017028111.1	XP_016883600.1	5 - 6	1006		129
	XM_017028112.1	XP_016883601.1	5 - 6	1006		129
GenBank mRNA	AF041260.1	-	5 - 6	1005		129
	AK225656.1	-	5 - 6	995		129
	AK294150.1	-	1 - 2	312		264
	AK295318.1	-	2 - 3	405		264
	AK308384.1	-	5 - 6	994		129
	AK311215.1	-	2 - 3	408		263
	AK315220.1	-	5 - 6	1226		129
	AK316038.1	-	2 - 3	298		264
	BC024044.1	-	5 - 6	1007	4645428	129
	BC126346.1	-	5 - 6	937	8992062	129
	BC126348.1	-	5 - 6	937	8992064	129
	CR749643.1	-	1 - 2	68		264

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC2000009516.hg
This assay targets the same location as HTA transcript cluster(s) TC20000960.hg

Additional Information:

This assay is in the 5'UTR region of the AK294150.1,AK295318.1,AK316038.1 transcripts.

• Set Membership: Ambion siRNA available, Amplicon length greater than or equal to 101, Mammalian Gene Collection, Homo sapiens, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene BCAS1

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR20013188.hg.1	ENST00000371435.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR20013188.hg.1	ENST00000371440.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR20013188.hg.1	ENST00000395961.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR20013188.hg.1	ENST00000434986.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR20013188.hg.1	ENST00000448710.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR20013188.hg.1	NM_003657.3	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR20013188.hg.1	TC20000960.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR20013189.hg.1	ENST00000371435.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR20013189.hg.1	ENST00000371440.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR20013189.hg.1	ENST00000395961.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR20013189.hg.1	ENST00000434986.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR20013189.hg.1	ENST00000448710.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR20013189.hg.1	NM_003657.3	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR20013189.hg.1	TC20000960.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR20013186.hg.1	ENST00000371435.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR20013186.hg.1	ENST00000371440.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR20013186.hg.1	ENST00000395961.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR20013186.hg.1	ENST00000434986.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR20013186.hg.1	ENST00000448710.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR20013186.hg.1	NM_003657.3	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR20013186.hg.1	TC20000960.hg.1	HTA TC
Affymetrix Human Clariom D Assay	PSR2000166496.hg.1	ENST00000371435.6	Ensembl
Affymetrix Human Clariom D Assay	PSR2000166496.hg.1	ENST00000371440.7	Ensembl
Affymetrix Human Clariom D Assay	PSR2000166496.hg.1	ENST00000395961.7	Ensembl
Affymetrix Human Clariom D Assay	PSR2000166496.hg.1	ENST00000422805.1	Ensembl
Affymetrix Human Clariom D Assay	PSR2000166496.hg.1	ENST00000448484.5	Ensembl
Affymetrix Human Clariom D Assay	PSR2000166496.hg.1	NM_003657.3	Refseq
Affymetrix Human Clariom D Assay	PSR2000166496.hg.1	TC2000009516.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR2000166496.hg.1	ENST00000371435.6	Ensembl
Affymetrix Human Clariom D Assay	PSR2000166496.hg.1	ENST00000371440.7	Ensembl
Affymetrix Human Clariom D Assay	PSR2000166496.hg.1	ENST00000395961.7	Ensembl
Affymetrix Human Clariom D Assay	PSR2000166496.hg.1	ENST00000422805.1	Ensembl
Affymetrix Human Clariom D Assay	PSR2000166496.hg.1	ENST00000448484.5	Ensembl
Affymetrix Human Clariom D Assay	PSR2000166496.hg.1	NM_003657.3	Refseq
Affymetrix Human Clariom D Assay	PSR2000166498.hg.1	ENST00000371435.6	Ensembl
Affymetrix Human Clariom D Assay	PSR2000166498.hg.1	ENST00000371440.7	Ensembl
Affymetrix Human Clariom D Assay	PSR2000166498.hg.1	ENST00000395961.7	Ensembl
Affymetrix Human Clariom D Assay	PSR2000166498.hg.1	ENST00000422805.1	Ensembl
Affymetrix Human Clariom D Assay	PSR2000166498.hg.1	ENST00000448484.5	Ensembl
Affymetrix Human Clariom D Assay	PSR2000166498.hg.1	NM_003657.3	Refseq
Affymetrix Human Clariom D Assay	PSR2000166498.hg.1	TC2000009516.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR2000166498.hg.1	ENST00000371435.6	Ensembl
Affymetrix Human Clariom D Assay	PSR2000166498.hg.1	ENST00000371440.7	Ensembl
Affymetrix Human Clariom D Assay	PSR2000166498.hg.1	ENST00000395961.7	Ensembl
Affymetrix Human Clariom D Assay	PSR2000166498.hg.1	ENST00000422805.1	Ensembl
Affymetrix Human Clariom D Assay	PSR2000166498.hg.1	ENST00000448484.5	Ensembl
Affymetrix Human Clariom D Assay	PSR2000166498.hg.1	NM_003657.3	Refseq
Affymetrix Human Clariom D Assay	PSR2000166499.hg.1	ENST00000371435.6	Ensembl
Affymetrix Human Clariom D Assay	PSR2000166499.hg.1	ENST00000371440.7	Ensembl
Affymetrix Human Clariom D Assay	PSR2000166499.hg.1	ENST00000395961.7	Ensembl
Affymetrix Human Clariom D Assay	PSR2000166499.hg.1	ENST00000422805.1	Ensembl
Affymetrix Human Clariom D Assay	PSR2000166499.hg.1	ENST00000448484.5	Ensembl
Affymetrix Human Clariom D Assay	PSR2000166499.hg.1	NM_003657.3	Refseq
Affymetrix Human Clariom D Assay	PSR2000166499.hg.1	TC2000009516.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR2000166499.hg.1	ENST00000371435.6	Ensembl
Affymetrix Human Clariom D Assay	PSR2000166499.hg.1	ENST00000371440.7	Ensembl
Affymetrix Human Clariom D Assay	PSR2000166499.hg.1	ENST00000395961.7	Ensembl
Affymetrix Human Clariom D Assay	PSR2000166499.hg.1	ENST00000422805.1	Ensembl
Affymetrix Human Clariom D Assay	PSR2000166499.hg.1	ENST00000448484.5	Ensembl
Affymetrix Human Clariom D Assay	PSR2000166499.hg.1	NM_003657.3	Refseq