Hs00958345_g1

• Gene Symbol: PDE6A
• Gene Name: phosphodiesterase 6A
• Gene Aliases: CGPR-A, PDEA, RP43
• Chromosome Location: Chr.5: 149857956 - 149944793 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: PDE6A
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_000440.2	NP_000431.2	18 - 19	2320		84
	XM_011537650.2	XP_011535952.1	15 - 16	1451		84
	XM_011537651.2	XP_011535953.1	12 - 13	1919		84
	XM_011537652.1	XP_011535954.1	13 - 14	1389		84
	XM_011537653.2	XP_011535955.1	12 - 13	2085		84
	XM_011537654.2	XP_011535956.1	12 - 13	2082		84
	XM_017009572.1	XP_016865061.1	16 - 17	2077		84
GenBank mRNA	AB593141.1	-	16 - 17	2077		84
	BC035909.1	-	18 - 19	2307	5492027	84
	BC144044.1	-	16 - 17	2311		84
	M26061.1	-	18 - 19	2320		84

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0500012445.hg.1
This assay targets the same location as HTA transcript cluster(s) TC05001928.hg.1

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, Mammalian Gene Collection, Detect Genomic DNA, Homo sapiens, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene PDE6A

Panther Classification:

Molecular Function -

phosphodiesterase

Gene Ontology Categories:

Process(es)

Wnt signaling pathway, calcium modulating pathway
visual perception
rhodopsin mediated signaling pathway
regulation of rhodopsin mediated signaling pathway
GMP metabolic process
regulation of cytosolic calcium ion concentration

Function(s)

metal ion binding
3',5'-cyclic-GMP phosphodiesterase activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR05026625.hg.1	TC05001928.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR05026625.hg.1	ENST00000255266.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR05026625.hg.1	NM_000440.2	Refseq
Affymetrix Human Clariom D Assay	PSR0500186619.hg.1	ENST00000255266.9	Ensembl
Affymetrix Human Clariom D Assay	PSR0500186619.hg.1	ENST00000508173.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0500186619.hg.1	ENST00000512670.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0500186619.hg.1	ENST00000613228.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0500186619.hg.1	ENST00000617647.4	Ensembl
Affymetrix Human Clariom D Assay	PSR0500186619.hg.1	NM_000440.2	Refseq
Affymetrix Human Clariom D Assay	PSR0500186619.hg.1	ENST00000255266.9	Ensembl
Affymetrix Human Clariom D Assay	PSR0500186619.hg.1	ENST00000508173.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0500186619.hg.1	ENST00000512670.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0500186619.hg.1	ENST00000613228.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0500186619.hg.1	ENST00000617647.4	Ensembl
Affymetrix Human Clariom D Assay	PSR0500186619.hg.1	NM_000440.2	Refseq
Affymetrix Human Clariom D Assay	PSR0500186619.hg.1	TC0500012445.hg.1	Clariom D TC