Hs00958620_m1

• Gene Symbol: HAVCR2
• Gene Name: hepatitis A virus cellular receptor 2
• Gene Aliases: CD366, HAVcr-2, KIM-3, TIM3, TIMD-3, TIMD3, Tim-3
• Chromosome Location: Chr.5: 157085832 - 157109237 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: HAVCR2
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_032782.4	NP_116171.3	3 - 4	734		78
GenBank mRNA	AB924452.1	-	2 - 3	417		78
	AF251707.1	-	3 - 4	606		78
	AF450242.1	-	3 - 4	537		78
	AF450243.1	-	3 - 4	537		78
	AK027334.1	-	3 - 4	523		78
	AK314406.1	-	3 - 4	541		78
	AY069944.1	-	3 - 4	480		78
	BC063431.1	-	3 - 4	624	5229539	78
	JX049979.1	-	3 - 4	480		78

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0500013388.hg.1
This assay targets the same location as HTA transcript cluster(s) TC05003434.hg.1

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, Mammalian Gene Collection, Homo sapiens, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene HAVCR2

Panther Classification:

Molecular Function -

immunoglobulin receptor superfamily

Gene Ontology Categories:

Process(es)

adaptive immune response
macrophage activation involved in immune response
natural killer cell tolerance induction
regulation of tolerance induction dependent upon immune response
negative regulation of T-helper 1 type immune response
negative regulation of natural killer cell mediated cytotoxicity directed against tumor cell target
inflammatory response
negative regulation of gene expression
negative regulation of myeloid dendritic cell activation
negative regulation of NF-kappaB transcription factor activity
negative regulation of interferon-alpha production
negative regulation of interferon-gamma production
negative regulation of interleukin-2 production
negative regulation of interleukin-3 production
negative regulation of interleukin-6 production
negative regulation of tumor necrosis factor production
positive regulation of chemokine production
positive regulation of interferon-gamma production
positive regulation of interleukin-1 production
positive regulation of interleukin-4 production
negative regulation of natural killer cell activation
toll-like receptor 3 signaling pathway
toll-like receptor 7 signaling pathway
toll-like receptor 9 signaling pathway
positive regulation of T cell proliferation
negative regulation of T cell proliferation
positive regulation of macrophage activation
innate immune response
defense response to Gram-positive bacterium
maternal process involved in female pregnancy
positive regulation of ERK1 and ERK2 cascade
cellular response to lipopolysaccharide
negative regulation of granulocyte colony-stimulating factor production
negative regulation of defense response to bacterium
positive regulation of defense response to bacterium
positive regulation of NIK/NF-kappaB signaling
positive regulation of tumor necrosis factor secretion
negative regulation of immunological synapse formation
negative regulation of T cell activation via T cell receptor contact with antigen bound to MHC molecule on antigen presenting cell

Function(s)

protein binding
metal ion binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	TC0500013388.hg.1	ENST00000307851.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500013388.hg.1	ENST00000307851.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500013388.hg.1	ENST00000307851.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500013388.hg.1	ENST00000307851.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500013388.hg.1	ENST00000307851.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500013388.hg.1	ENST00000307851.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500013388.hg.1	ENST00000307851.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500013388.hg.1	ENST00000307851.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500013388.hg.1	ENST00000307851.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500013388.hg.1	ENST00000307851.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500013388.hg.1	ENST00000307851.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500013388.hg.1	ENST00000307851.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500013388.hg.1	ENST00000307851.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500013388.hg.1	ENST00000517358.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500013388.hg.1	ENST00000517358.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500013388.hg.1	ENST00000521665.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500013388.hg.1	ENST00000521665.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500013388.hg.1	ENST00000521665.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500013388.hg.1	ENST00000521665.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500013388.hg.1	ENST00000521665.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500013388.hg.1	ENST00000521665.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500013388.hg.1	ENST00000522593.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500013388.hg.1	ENST00000522593.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500013388.hg.1	ENST00000522593.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500013388.hg.1	ENST00000522593.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500013388.hg.1	ENST00000522593.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500013388.hg.1	ENST00000522593.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500013388.hg.1	ENST00000522593.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500013388.hg.1	ENST00000522593.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500013388.hg.1	ENST00000522593.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500013388.hg.1	ENST00000522902.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500013388.hg.1	ENST00000522902.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500013388.hg.1	ENST00000522902.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500013388.hg.1	ENST00000522902.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500013388.hg.1	ENST00000522902.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500013388.hg.1	NM_032782.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0500013388.hg.1	NM_032782.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0500013388.hg.1	NM_032782.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0500013388.hg.1	NM_032782.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0500013388.hg.1	NM_032782.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0500013388.hg.1	NM_032782.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0500013388.hg.1	NM_032782.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0500013388.hg.1	NM_032782.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0500013388.hg.1	NM_032782.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0500013388.hg.1	NM_032782.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0500013388.hg.1	NM_032782.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0500013388.hg.1	NM_032782.4	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR05027556.hg.1	TC05003434.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR05027556.hg.1	ENST00000307851.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR05027556.hg.1	ENST00000522593.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR05027556.hg.1	NM_032782.4	Refseq
Affymetrix Human Clariom D Assay	TC0500013388.hg.1	ENST00000307851.8	Ensembl
Affymetrix Human Clariom D Assay	TC0500013388.hg.1	ENST00000307851.8	Ensembl
Affymetrix Human Clariom D Assay	TC0500013388.hg.1	ENST00000307851.8	Ensembl
Affymetrix Human Clariom D Assay	TC0500013388.hg.1	ENST00000307851.8	Ensembl
Affymetrix Human Clariom D Assay	TC0500013388.hg.1	ENST00000307851.8	Ensembl
Affymetrix Human Clariom D Assay	TC0500013388.hg.1	ENST00000307851.8	Ensembl
Affymetrix Human Clariom D Assay	TC0500013388.hg.1	ENST00000307851.8	Ensembl
Affymetrix Human Clariom D Assay	TC0500013388.hg.1	ENST00000307851.8	Ensembl
Affymetrix Human Clariom D Assay	TC0500013388.hg.1	ENST00000307851.8	Ensembl
Affymetrix Human Clariom D Assay	TC0500013388.hg.1	ENST00000307851.8	Ensembl
Affymetrix Human Clariom D Assay	TC0500013388.hg.1	ENST00000307851.8	Ensembl
Affymetrix Human Clariom D Assay	TC0500013388.hg.1	ENST00000307851.8	Ensembl
Affymetrix Human Clariom D Assay	TC0500013388.hg.1	ENST00000307851.8	Ensembl
Affymetrix Human Clariom D Assay	TC0500013388.hg.1	ENST00000517358.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500013388.hg.1	ENST00000517358.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500013388.hg.1	ENST00000521665.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500013388.hg.1	ENST00000521665.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500013388.hg.1	ENST00000521665.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500013388.hg.1	ENST00000521665.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500013388.hg.1	ENST00000521665.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500013388.hg.1	ENST00000521665.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500013388.hg.1	ENST00000522593.5	Ensembl
Affymetrix Human Clariom D Assay	TC0500013388.hg.1	ENST00000522593.5	Ensembl
Affymetrix Human Clariom D Assay	TC0500013388.hg.1	ENST00000522593.5	Ensembl
Affymetrix Human Clariom D Assay	TC0500013388.hg.1	ENST00000522593.5	Ensembl
Affymetrix Human Clariom D Assay	TC0500013388.hg.1	ENST00000522593.5	Ensembl
Affymetrix Human Clariom D Assay	TC0500013388.hg.1	ENST00000522593.5	Ensembl
Affymetrix Human Clariom D Assay	TC0500013388.hg.1	ENST00000522593.5	Ensembl
Affymetrix Human Clariom D Assay	TC0500013388.hg.1	ENST00000522593.5	Ensembl
Affymetrix Human Clariom D Assay	TC0500013388.hg.1	ENST00000522593.5	Ensembl
Affymetrix Human Clariom D Assay	TC0500013388.hg.1	ENST00000522902.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500013388.hg.1	ENST00000522902.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500013388.hg.1	ENST00000522902.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500013388.hg.1	ENST00000522902.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500013388.hg.1	ENST00000522902.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500013388.hg.1	NM_032782.4	Refseq
Affymetrix Human Clariom D Assay	TC0500013388.hg.1	NM_032782.4	Refseq
Affymetrix Human Clariom D Assay	TC0500013388.hg.1	NM_032782.4	Refseq
Affymetrix Human Clariom D Assay	TC0500013388.hg.1	NM_032782.4	Refseq
Affymetrix Human Clariom D Assay	TC0500013388.hg.1	NM_032782.4	Refseq
Affymetrix Human Clariom D Assay	TC0500013388.hg.1	NM_032782.4	Refseq
Affymetrix Human Clariom D Assay	TC0500013388.hg.1	NM_032782.4	Refseq
Affymetrix Human Clariom D Assay	TC0500013388.hg.1	NM_032782.4	Refseq
Affymetrix Human Clariom D Assay	TC0500013388.hg.1	NM_032782.4	Refseq
Affymetrix Human Clariom D Assay	TC0500013388.hg.1	NM_032782.4	Refseq
Affymetrix Human Clariom D Assay	TC0500013388.hg.1	NM_032782.4	Refseq
Affymetrix Human Clariom D Assay	TC0500013388.hg.1	NM_032782.4	Refseq
Affymetrix Human Clariom D Assay	PSR0500197277.hg.1	ENST00000307851.8	Ensembl
Affymetrix Human Clariom D Assay	PSR0500197277.hg.1	ENST00000521665.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0500197277.hg.1	ENST00000522593.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0500197277.hg.1	NM_032782.4	Refseq
Affymetrix Human Clariom D Assay	PSR0500197277.hg.1	ENST00000307851.8	Ensembl
Affymetrix Human Clariom D Assay	PSR0500197277.hg.1	ENST00000521665.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0500197277.hg.1	ENST00000522593.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0500197277.hg.1	NM_032782.4	Refseq
Affymetrix Human Clariom D Assay	PSR0500197277.hg.1	TC0500013388.hg.1	Clariom D TC