Hs00959221_g1

• Gene Symbol: SPTBN2
• Gene Name: spectrin beta, non-erythrocytic 2
• Gene Aliases: GTRAP41, SCA5, SCAR14
• Chromosome Location: Chr.11: 66682496 - 66729361 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: SPTBN2
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_006946.2	NP_008877.1	24 - 25	5056		64
	XM_005274192.4	XP_005274249.1	25 - 26	5718		64
	XM_005274193.3	XP_005274250.1	24 - 25	5492		64
	XM_006718669.3	XP_006718732.1	23 - 24	7405		64
	XM_006718671.3	XP_006718734.1	25 - 26	5118		64
	XM_017018174.1	XP_016873663.1	25 - 26	5810		64
	XM_017018175.1	XP_016873664.1	25 - 26	5439		64
	XM_017018176.1	XP_016873665.1	25 - 26	5159		64
	XM_017018177.1	XP_016873666.1	24 - 25	5348		64
	XM_017018178.1	XP_016873667.1	24 - 25	5031		64
GenBank mRNA	AB008567.1	-	24 - 25	5056		64
	BC131819.1	-	8 - 9	1318		64

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC1100011300.hg.1
This assay targets the same location as HTA transcript cluster(s) TC11001975.hg.1

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, Mammalian Gene Collection, Detect Genomic DNA, Homo sapiens, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene SPTBN2

Gene Ontology Categories:

Process(es)

MAPK cascade
ER to Golgi vesicle-mediated transport
cytoskeleton organization
axon guidance
synapse assembly
vesicle-mediated transport
antigen processing and presentation of exogenous peptide antigen via MHC class II
cerebellar Purkinje cell layer morphogenesis
adult behavior
multicellular organism growth
positive regulation of GTPase activity
actin filament capping
cellular response to ethanol
cell-cell adhesion

Function(s)

actin binding
Ras guanyl-nucleotide exchange factor activity
structural constituent of cytoskeleton
phospholipid binding
cadherin binding involved in cell-cell adhesion

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR11023681.hg.1	ENST00000309996.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR11023681.hg.1	ENST00000529997.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR11023681.hg.1	ENST00000533211.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR11023681.hg.1	NM_006946.3	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR11023681.hg.1	TC11001975.hg.1	HTA TC
Affymetrix Human Clariom D Assay	PSR1100187040.hg.1	ENST00000309996.6	Ensembl
Affymetrix Human Clariom D Assay	PSR1100187040.hg.1	ENST00000529997.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1100187040.hg.1	ENST00000533211.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1100187040.hg.1	NM_006946.3	Refseq
Affymetrix Human Clariom D Assay	PSR1100187040.hg.1	ENST00000309996.6	Ensembl
Affymetrix Human Clariom D Assay	PSR1100187040.hg.1	ENST00000529997.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1100187040.hg.1	ENST00000533211.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1100187040.hg.1	NM_006946.3	Refseq
Affymetrix Human Clariom D Assay	PSR1100187040.hg.1	TC1100011300.hg.1	Clariom D TC