Hs00961009_g1

• Gene Symbol: PATL1
• Gene Name: PAT1 homolog 1, processing body mRNA decay factor
• Gene Aliases: Pat1b, hPat1b
• Chromosome Location: Chr.11: 59636716 - 59669040 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: PATL1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_152716.2	NP_689929.2	2 - 3	269		97
	XM_005273833.4	XP_005273890.1	2 - 3	1391		97
	XM_005273834.1	XP_005273891.1	2 - 3	271		97
	XM_017017339.1	XP_016872828.1	2 - 3	271		97
GenBank mRNA	AK127943.1	-	2 - 3	229		97
	AL831992.2	-	2 - 3	210		97
	DC409866.1	-	2 - 3	269		97

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC1100010981.hg
This assay targets the same location as HTA transcript cluster(s) TC11001829.hg

Additional Information:

This assay is in the 5'UTR region of the XM_017017339.1 transcripts.

• Set Membership: Ambion siRNA available, Amplicon length between 86 and 100, Detect Genomic DNA, Homo sapiens, 1700, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene PATL1

Panther Classification:

Molecular Function -

RNA processing factor

Gene Ontology Categories:

Process(es)

deadenylation-dependent decapping of nuclear-transcribed mRNA
cytoplasmic mRNA processing body assembly
exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay

Function(s)

RNA binding
protein binding
poly(U) RNA binding
poly(G) binding
poly(A) RNA binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	TC1900010685.hg.1	ENST00000597336.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900010685.hg.1	ENST00000597336.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR11021075.hg.1	ENST00000300146.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR11021075.hg.1	ENST00000428532.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR11021075.hg.1	NM_152716.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR11021075.hg.1	TC11001829.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR11021076.hg.1	ENST00000300146.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR11021076.hg.1	ENST00000428532.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR11021076.hg.1	NM_152716.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR11021076.hg.1	TC11001829.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	TC0900008867.hg.1	ENST00000449048.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900008867.hg.1	ENST00000449048.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100010981.hg.1	ENST00000300146.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100010981.hg.1	ENST00000300146.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100010981.hg.1	ENST00000300146.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100010981.hg.1	ENST00000300146.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100010981.hg.1	ENST00000300146.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100010981.hg.1	ENST00000300146.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100010981.hg.1	ENST00000300146.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100010981.hg.1	ENST00000300146.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100010981.hg.1	ENST00000300146.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100010981.hg.1	ENST00000300146.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100010981.hg.1	ENST00000300146.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100010981.hg.1	ENST00000300146.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100010981.hg.1	ENST00000300146.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100010981.hg.1	ENST00000300146.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100010981.hg.1	ENST00000300146.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100010981.hg.1	ENST00000300146.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100010981.hg.1	ENST00000300146.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100010981.hg.1	ENST00000300146.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100010981.hg.1	ENST00000300146.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100010981.hg.1	ENST00000300146.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100010981.hg.1	ENST00000300146.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100010981.hg.1	ENST00000300146.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100010981.hg.1	ENST00000531919.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100010981.hg.1	ENST00000531919.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100010981.hg.1	ENST00000531919.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100010981.hg.1	NM_152716.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100010981.hg.1	NM_152716.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100010981.hg.1	NM_152716.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100010981.hg.1	NM_152716.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100010981.hg.1	NM_152716.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100010981.hg.1	NM_152716.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100010981.hg.1	NM_152716.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100010981.hg.1	NM_152716.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100010981.hg.1	NM_152716.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100010981.hg.1	NM_152716.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100010981.hg.1	NM_152716.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100010981.hg.1	NM_152716.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100010981.hg.1	NM_152716.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100010981.hg.1	NM_152716.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100010981.hg.1	NM_152716.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100010981.hg.1	NM_152716.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100010981.hg.1	NM_152716.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100010981.hg.1	NM_152716.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100010981.hg.1	NM_152716.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100010981.hg.1	NM_152716.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100010981.hg.1	NM_152716.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100010981.hg.1	NM_152716.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100010981.hg.1	NM_152716.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR11021074.hg.1	ENST00000300146.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR11021074.hg.1	ENST00000428532.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR11021074.hg.1	NM_152716.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR11021074.hg.1	TC11001829.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR11021078.hg.1	NM_152716.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR11021078.hg.1	TC11001829.hg.1	HTA TC
Affymetrix Human Clariom D Assay	PSR1100182825.hg.1	ENST00000300146.9	Ensembl
Affymetrix Human Clariom D Assay	PSR1100182825.hg.1	NM_152716.2	Refseq
Affymetrix Human Clariom D Assay	PSR1100182825.hg.1	ENST00000300146.9	Ensembl
Affymetrix Human Clariom D Assay	PSR1100182825.hg.1	NM_152716.2	Refseq
Affymetrix Human Clariom D Assay	PSR1100182825.hg.1	TC1100010981.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1100182826.hg.1	NM_152716.2	Refseq
Affymetrix Human Clariom D Assay	PSR1100182826.hg.1	NM_152716.2	Refseq
Affymetrix Human Clariom D Assay	PSR1100182826.hg.1	TC1100010981.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1100182823.hg.1	ENST00000300146.9	Ensembl
Affymetrix Human Clariom D Assay	PSR1100182823.hg.1	NM_152716.2	Refseq
Affymetrix Human Clariom D Assay	PSR1100182823.hg.1	ENST00000300146.9	Ensembl
Affymetrix Human Clariom D Assay	PSR1100182823.hg.1	NM_152716.2	Refseq
Affymetrix Human Clariom D Assay	PSR1100182823.hg.1	TC1100010981.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1100182822.hg.1	ENST00000300146.9	Ensembl
Affymetrix Human Clariom D Assay	PSR1100182822.hg.1	NM_152716.2	Refseq
Affymetrix Human Clariom D Assay	PSR1100182822.hg.1	ENST00000300146.9	Ensembl
Affymetrix Human Clariom D Assay	PSR1100182822.hg.1	NM_152716.2	Refseq
Affymetrix Human Clariom D Assay	PSR1100182822.hg.1	TC1100010981.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	TC1900010685.hg.1	ENST00000597336.1	Ensembl
Affymetrix Human Clariom D Assay	TC1900010685.hg.1	ENST00000597336.1	Ensembl
Affymetrix Human Clariom D Assay	TC0900008867.hg.1	ENST00000449048.2	Ensembl
Affymetrix Human Clariom D Assay	TC0900008867.hg.1	ENST00000449048.2	Ensembl
Affymetrix Human Clariom D Assay	TC1100010981.hg.1	ENST00000300146.9	Ensembl
Affymetrix Human Clariom D Assay	TC1100010981.hg.1	ENST00000300146.9	Ensembl
Affymetrix Human Clariom D Assay	TC1100010981.hg.1	ENST00000300146.9	Ensembl
Affymetrix Human Clariom D Assay	TC1100010981.hg.1	ENST00000300146.9	Ensembl
Affymetrix Human Clariom D Assay	TC1100010981.hg.1	ENST00000300146.9	Ensembl
Affymetrix Human Clariom D Assay	TC1100010981.hg.1	ENST00000300146.9	Ensembl
Affymetrix Human Clariom D Assay	TC1100010981.hg.1	ENST00000300146.9	Ensembl
Affymetrix Human Clariom D Assay	TC1100010981.hg.1	ENST00000300146.9	Ensembl
Affymetrix Human Clariom D Assay	TC1100010981.hg.1	ENST00000300146.9	Ensembl
Affymetrix Human Clariom D Assay	TC1100010981.hg.1	ENST00000300146.9	Ensembl
Affymetrix Human Clariom D Assay	TC1100010981.hg.1	ENST00000300146.9	Ensembl
Affymetrix Human Clariom D Assay	TC1100010981.hg.1	ENST00000300146.9	Ensembl
Affymetrix Human Clariom D Assay	TC1100010981.hg.1	ENST00000300146.9	Ensembl
Affymetrix Human Clariom D Assay	TC1100010981.hg.1	ENST00000300146.9	Ensembl
Affymetrix Human Clariom D Assay	TC1100010981.hg.1	ENST00000300146.9	Ensembl
Affymetrix Human Clariom D Assay	TC1100010981.hg.1	ENST00000300146.9	Ensembl
Affymetrix Human Clariom D Assay	TC1100010981.hg.1	ENST00000300146.9	Ensembl
Affymetrix Human Clariom D Assay	TC1100010981.hg.1	ENST00000300146.9	Ensembl
Affymetrix Human Clariom D Assay	TC1100010981.hg.1	ENST00000300146.9	Ensembl
Affymetrix Human Clariom D Assay	TC1100010981.hg.1	ENST00000300146.9	Ensembl
Affymetrix Human Clariom D Assay	TC1100010981.hg.1	ENST00000300146.9	Ensembl
Affymetrix Human Clariom D Assay	TC1100010981.hg.1	ENST00000300146.9	Ensembl
Affymetrix Human Clariom D Assay	TC1100010981.hg.1	ENST00000531919.1	Ensembl
Affymetrix Human Clariom D Assay	TC1100010981.hg.1	ENST00000531919.1	Ensembl
Affymetrix Human Clariom D Assay	TC1100010981.hg.1	ENST00000531919.1	Ensembl
Affymetrix Human Clariom D Assay	TC1100010981.hg.1	NM_152716.2	Refseq
Affymetrix Human Clariom D Assay	TC1100010981.hg.1	NM_152716.2	Refseq
Affymetrix Human Clariom D Assay	TC1100010981.hg.1	NM_152716.2	Refseq
Affymetrix Human Clariom D Assay	TC1100010981.hg.1	NM_152716.2	Refseq
Affymetrix Human Clariom D Assay	TC1100010981.hg.1	NM_152716.2	Refseq
Affymetrix Human Clariom D Assay	TC1100010981.hg.1	NM_152716.2	Refseq
Affymetrix Human Clariom D Assay	TC1100010981.hg.1	NM_152716.2	Refseq
Affymetrix Human Clariom D Assay	TC1100010981.hg.1	NM_152716.2	Refseq
Affymetrix Human Clariom D Assay	TC1100010981.hg.1	NM_152716.2	Refseq
Affymetrix Human Clariom D Assay	TC1100010981.hg.1	NM_152716.2	Refseq
Affymetrix Human Clariom D Assay	TC1100010981.hg.1	NM_152716.2	Refseq
Affymetrix Human Clariom D Assay	TC1100010981.hg.1	NM_152716.2	Refseq
Affymetrix Human Clariom D Assay	TC1100010981.hg.1	NM_152716.2	Refseq
Affymetrix Human Clariom D Assay	TC1100010981.hg.1	NM_152716.2	Refseq
Affymetrix Human Clariom D Assay	TC1100010981.hg.1	NM_152716.2	Refseq
Affymetrix Human Clariom D Assay	TC1100010981.hg.1	NM_152716.2	Refseq
Affymetrix Human Clariom D Assay	TC1100010981.hg.1	NM_152716.2	Refseq
Affymetrix Human Clariom D Assay	TC1100010981.hg.1	NM_152716.2	Refseq
Affymetrix Human Clariom D Assay	TC1100010981.hg.1	NM_152716.2	Refseq
Affymetrix Human Clariom D Assay	TC1100010981.hg.1	NM_152716.2	Refseq
Affymetrix Human Clariom D Assay	TC1100010981.hg.1	NM_152716.2	Refseq
Affymetrix Human Clariom D Assay	TC1100010981.hg.1	NM_152716.2	Refseq
Affymetrix Human Clariom D Assay	TC1100010981.hg.1	NM_152716.2	Refseq

Array Name	Probe IDs	Targets	Target Type
ABI Human Genome Survey Microarray Version 2.0	331519	-	-