Hs00961630_g1

• Gene Symbol: SF3B1
• Gene Name: splicing factor 3b subunit 1
• Gene Aliases: Hsh155, MDS, PRP10, PRPF10, SAP155, SF3b155
• Chromosome Location: Chr.2: 197391974 - 197435093 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: SF3B1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_012433.3	NP_036565.2	17 - 18	2586		67
GenBank mRNA	AF054284.1	-	17 - 18	2492		67
	AK308122.1	-	17 - 18	2539		67
	BE168209.1	-	2 - 3			67
	BE168220.1	-	2 - 3			67

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0200015348.hg.1
This assay targets the same location as HTA transcript cluster(s) TC02002647.hg.1

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, Detect Genomic DNA, Homo sapiens, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene SF3B1

Panther Classification:

Molecular Function -

RNA splicing factor

Gene Ontology Categories:

Process(es)

spliceosomal complex assembly
RNA splicing, via transesterification reactions
mRNA splicing, via spliceosome
positive regulation of gene expression, epigenetic

Function(s)

mRNA binding
protein binding
poly(A) RNA binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR02042497.hg.1	TC02002647.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR02042497.hg.1	ENST00000335508.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR02042497.hg.1	NM_012433.3	Refseq
Affymetrix Human Clariom D Assay	PSR0200212386.hg.1	ENST00000335508.10	Ensembl
Affymetrix Human Clariom D Assay	PSR0200212386.hg.1	NM_012433.3	Refseq
Affymetrix Human Clariom D Assay	PSR0200212386.hg.1	ENST00000335508.10	Ensembl
Affymetrix Human Clariom D Assay	PSR0200212386.hg.1	NM_012433.3	Refseq
Affymetrix Human Clariom D Assay	PSR0200212386.hg.1	TC0200015348.hg.1	Clariom D TC