Hs00967411_m1

• Gene Symbol: PTPRU
• Gene Name: protein tyrosine phosphatase, receptor type U
• Gene Aliases: FMI, PCP-2, PTP, PTP-J, PTP-PI, PTP-RO, PTPPSI, PTPRO, PTPU2, R-PTP-PSI, R-PTP-U, hPTP-J
• Chromosome Location: Chr.1: 29236516 - 29326813 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: PTPRU
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001195001.1	NP_001181930.1	14 - 15	2447		59
	NM_133177.3	NP_573438.3	14 - 15	2447		59
	NM_133178.3	NP_573439.2	14 - 15	2447		59
	XM_006710269.2	XP_006710332.1	14 - 15	2422		59
GenBank mRNA	AB208855.1	-	10 - 11	1741		59
	BC146655.1	-	14 - 15	2414	40147934	59
	U71075.1	-	14 - 15	2321		59
	U73727.1	-	14 - 15	2438		59
	X97198.1	-	14 - 15	2432		59

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0100007584.hg.1
This assay targets the same location as HTA transcript cluster(s) TC01000398.hg.1

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, Protein Phosphatase, Mammalian Gene Collection, Homo sapiens, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene PTPRU

Panther Classification:

Molecular Function -

extracellular matrix glycoprotein

Gene Ontology Categories:

Process(es)

protein dephosphorylation
cell adhesion
transmembrane receptor protein tyrosine phosphatase signaling pathway
negative regulation of cell proliferation
single organismal cell-cell adhesion
cell differentiation
negative regulation of cell migration
organ regeneration
homotypic cell-cell adhesion
protein localization to cell surface
peptidyl-tyrosine dephosphorylation
response to glucocorticoid
canonical Wnt signaling pathway

Function(s)

protein tyrosine phosphatase activity
transmembrane receptor protein tyrosine phosphatase activity
protein binding
beta-catenin binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR01006122.hg.1	TC01000398.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR01006122.hg.1	ENST00000323874.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR01006122.hg.1	ENST00000345512.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR01006122.hg.1	ENST00000356870.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR01006122.hg.1	ENST00000373779.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR01006122.hg.1	ENST00000428026.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR01006122.hg.1	ENST00000460170.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR01006122.hg.1	NM_001195001.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR01006122.hg.1	NM_005704.4	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR01006122.hg.1	NM_133177.3	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR01006122.hg.1	NM_133178.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100013509.hg.1	ENST00000515851.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100013509.hg.1	ENST00000515851.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100013509.hg.1	ENST00000515851.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100013509.hg.1	ENST00000515851.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0100153244.hg.1	ENST00000345512.7	Ensembl
Affymetrix Human Clariom D Assay	PSR0100153244.hg.1	ENST00000373779.7	Ensembl
Affymetrix Human Clariom D Assay	PSR0100153244.hg.1	ENST00000415600.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0100153244.hg.1	ENST00000428026.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0100153244.hg.1	ENST00000460170.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0100153244.hg.1	ENST00000531385.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0100153244.hg.1	NM_001195001.1	Refseq
Affymetrix Human Clariom D Assay	PSR0100153244.hg.1	NM_005704.4	Refseq
Affymetrix Human Clariom D Assay	PSR0100153244.hg.1	NM_133177.3	Refseq
Affymetrix Human Clariom D Assay	PSR0100153244.hg.1	NM_133178.3	Refseq
Affymetrix Human Clariom D Assay	PSR0100153244.hg.1	ENST00000345512.7	Ensembl
Affymetrix Human Clariom D Assay	PSR0100153244.hg.1	ENST00000373779.7	Ensembl
Affymetrix Human Clariom D Assay	PSR0100153244.hg.1	ENST00000415600.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0100153244.hg.1	ENST00000428026.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0100153244.hg.1	ENST00000460170.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0100153244.hg.1	ENST00000531385.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0100153244.hg.1	NM_001195001.1	Refseq
Affymetrix Human Clariom D Assay	PSR0100153244.hg.1	NM_005704.4	Refseq
Affymetrix Human Clariom D Assay	PSR0100153244.hg.1	NM_133177.3	Refseq
Affymetrix Human Clariom D Assay	PSR0100153244.hg.1	NM_133178.3	Refseq
Affymetrix Human Clariom D Assay	PSR0100153244.hg.1	TC0100007584.hg.1	Clariom D TC