Hs00968360_g1

• Gene Symbol: LTA
• Gene Name: lymphotoxin alpha
• Gene Aliases: LT, TNFB, TNFSF1, TNLG1E
• Chromosome Location: Chr.6: 31560550 - 31574324 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: LTA
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_000595.3	NP_000586.2	2 - 3	262		63
	NM_001159740.2	NP_001153212.1	2 - 3	313		63
	XM_011514615.2	XP_011512917.1	5 - 6	1197		63
	XM_011514616.2	XP_011512918.1	3 - 4	932		63
	XM_011514617.2	XP_011512919.1	5 - 6	799		63
	XM_011514618.1	XP_011512920.1	5 - 6	745		63
GenBank mRNA	A06316.1	-	2 - 3	139		63
	BC034729.1	-	1 - 2	106	4341621	63
	BP338937.1	-	2 - 3	313		63
	CR542253.1	-	1 - 2	100		63
	CR542273.1	-	1 - 2	100		63
	D00102.1	-	2 - 3	162		63
	D12614.1	-	2 - 3	240		63
	DQ123821.1	-	2 - 3	509		63
	X01393.1	-	2 - 3	179		63

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0600007595.hg.1
This assay targets the same location as HTA transcript cluster(s) TC06000370.hg.1, TC6_cox_hap2000066.hg.1, TC6_dbb_hap3000057.hg.1, TC6_mann_hap4000058.hg.1, TC6_mcf_hap5000052.hg.1, TC6_qbl_hap6000057.hg.1, TC6_ssto_hap7000053.hg.1

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, Mammalian Gene Collection, Detect Genomic DNA, Homo sapiens, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene LTA

Gene Ontology Categories:

Process(es)

response to hypoxia
positive regulation of chronic inflammatory response to antigenic stimulus
positive regulation of humoral immune response mediated by circulating immunoglobulin
apoptotic process
humoral immune response
signal transduction
cell-cell signaling
response to nutrient
response to xenobiotic stimulus
response to lipopolysaccharide
positive regulation of interferon-gamma production
tumor necrosis factor-mediated signaling pathway
positive regulation of apoptotic process
negative regulation of fibroblast proliferation
lymph node development
defense response to Gram-positive bacterium
positive regulation of glial cell proliferation

Function(s)

signaling receptor binding
cytokine activity
tumor necrosis factor receptor binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR6_qbl_hap6000920.hg.1	TC6_qbl_hap6000057.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR6_qbl_hap6000920.hg.1	NM_000595.3	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_qbl_hap6000920.hg.1	NM_001159740.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_ssto_hap7000731.hg.1	TC6_ssto_hap7000053.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR6_ssto_hap7000731.hg.1	NM_000595.3	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_ssto_hap7000731.hg.1	NM_001159740.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600007595.hg.1	ENST00000418386.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600007595.hg.1	ENST00000418386.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600007595.hg.1	ENST00000418386.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600007595.hg.1	ENST00000418386.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600007595.hg.1	ENST00000418386.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600007595.hg.1	ENST00000418386.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600007595.hg.1	ENST00000418386.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600007595.hg.1	ENST00000418386.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600007595.hg.1	ENST00000418386.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600007595.hg.1	ENST00000454783.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600007595.hg.1	ENST00000454783.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600007595.hg.1	ENST00000454783.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600007595.hg.1	ENST00000454783.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600007595.hg.1	ENST00000454783.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600007595.hg.1	ENST00000454783.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600007595.hg.1	ENST00000454783.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600007595.hg.1	ENST00000454783.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600007595.hg.1	ENST00000454783.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600007595.hg.1	ENST00000454783.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600007595.hg.1	ENST00000471842.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600007595.hg.1	ENST00000471842.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600007595.hg.1	ENST00000471842.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600007595.hg.1	ENST00000471842.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600007595.hg.1	ENST00000471842.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600007595.hg.1	ENST00000471842.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600007595.hg.1	ENST00000471842.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600007595.hg.1	ENST00000471842.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600007595.hg.1	ENST00000471842.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600007595.hg.1	ENST00000471842.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600007595.hg.1	ENST00000489638.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600007595.hg.1	ENST00000489638.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600007595.hg.1	ENST00000489638.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600007595.hg.1	ENST00000489638.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600007595.hg.1	ENST00000489638.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600007595.hg.1	ENST00000489638.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600007595.hg.1	ENST00000489638.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600007595.hg.1	ENST00000489638.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600007595.hg.1	ENST00000489638.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600007595.hg.1	NM_000595.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600007595.hg.1	NM_000595.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600007595.hg.1	NM_000595.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600007595.hg.1	NM_000595.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600007595.hg.1	NM_000595.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600007595.hg.1	NM_000595.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600007595.hg.1	NM_000595.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600007595.hg.1	NM_000595.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600007595.hg.1	NM_000595.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600007595.hg.1	NM_001159740.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600007595.hg.1	NM_001159740.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600007595.hg.1	NM_001159740.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600007595.hg.1	NM_001159740.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600007595.hg.1	NM_001159740.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600007595.hg.1	NM_001159740.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600007595.hg.1	NM_001159740.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600007595.hg.1	NM_001159740.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600007595.hg.1	NM_001159740.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR06003545.hg.1	ENST00000418386.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR06003545.hg.1	ENST00000436827.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR06003545.hg.1	ENST00000454783.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR06003545.hg.1	NM_000595.3	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR06003545.hg.1	NM_001159740.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR06003545.hg.1	TC06000370.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR6_mann_hap4000895.hg.1	TC6_mann_hap4000058.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR6_mann_hap4000895.hg.1	NM_000595.3	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_mann_hap4000895.hg.1	NM_001159740.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_cox_hap2000939.hg.1	TC6_cox_hap2000066.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR6_cox_hap2000939.hg.1	NM_000595.3	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_cox_hap2000939.hg.1	NM_001159740.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_dbb_hap3000882.hg.1	TC6_dbb_hap3000057.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR6_dbb_hap3000882.hg.1	NM_000595.3	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_dbb_hap3000882.hg.1	NM_001159740.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_mcf_hap5000754.hg.1	TC6_mcf_hap5000052.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR6_mcf_hap5000754.hg.1	NM_000595.3	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_mcf_hap5000754.hg.1	NM_001159740.2	Refseq
Affymetrix Human Clariom D Assay	TC0600007595.hg.1	ENST00000418386.2	Ensembl
Affymetrix Human Clariom D Assay	TC0600007595.hg.1	ENST00000418386.2	Ensembl
Affymetrix Human Clariom D Assay	TC0600007595.hg.1	ENST00000418386.2	Ensembl
Affymetrix Human Clariom D Assay	TC0600007595.hg.1	ENST00000418386.2	Ensembl
Affymetrix Human Clariom D Assay	TC0600007595.hg.1	ENST00000418386.2	Ensembl
Affymetrix Human Clariom D Assay	TC0600007595.hg.1	ENST00000418386.2	Ensembl
Affymetrix Human Clariom D Assay	TC0600007595.hg.1	ENST00000418386.2	Ensembl
Affymetrix Human Clariom D Assay	TC0600007595.hg.1	ENST00000418386.2	Ensembl
Affymetrix Human Clariom D Assay	TC0600007595.hg.1	ENST00000418386.2	Ensembl
Affymetrix Human Clariom D Assay	TC0600007595.hg.1	ENST00000454783.5	Ensembl
Affymetrix Human Clariom D Assay	TC0600007595.hg.1	ENST00000454783.5	Ensembl
Affymetrix Human Clariom D Assay	TC0600007595.hg.1	ENST00000454783.5	Ensembl
Affymetrix Human Clariom D Assay	TC0600007595.hg.1	ENST00000454783.5	Ensembl
Affymetrix Human Clariom D Assay	TC0600007595.hg.1	ENST00000454783.5	Ensembl
Affymetrix Human Clariom D Assay	TC0600007595.hg.1	ENST00000454783.5	Ensembl
Affymetrix Human Clariom D Assay	TC0600007595.hg.1	ENST00000454783.5	Ensembl
Affymetrix Human Clariom D Assay	TC0600007595.hg.1	ENST00000454783.5	Ensembl
Affymetrix Human Clariom D Assay	TC0600007595.hg.1	ENST00000454783.5	Ensembl
Affymetrix Human Clariom D Assay	TC0600007595.hg.1	ENST00000454783.5	Ensembl
Affymetrix Human Clariom D Assay	TC0600007595.hg.1	ENST00000471842.1	Ensembl
Affymetrix Human Clariom D Assay	TC0600007595.hg.1	ENST00000471842.1	Ensembl
Affymetrix Human Clariom D Assay	TC0600007595.hg.1	ENST00000471842.1	Ensembl
Affymetrix Human Clariom D Assay	TC0600007595.hg.1	ENST00000471842.1	Ensembl
Affymetrix Human Clariom D Assay	TC0600007595.hg.1	ENST00000471842.1	Ensembl
Affymetrix Human Clariom D Assay	TC0600007595.hg.1	ENST00000471842.1	Ensembl
Affymetrix Human Clariom D Assay	TC0600007595.hg.1	ENST00000471842.1	Ensembl
Affymetrix Human Clariom D Assay	TC0600007595.hg.1	ENST00000471842.1	Ensembl
Affymetrix Human Clariom D Assay	TC0600007595.hg.1	ENST00000471842.1	Ensembl
Affymetrix Human Clariom D Assay	TC0600007595.hg.1	ENST00000471842.1	Ensembl
Affymetrix Human Clariom D Assay	TC0600007595.hg.1	ENST00000489638.5	Ensembl
Affymetrix Human Clariom D Assay	TC0600007595.hg.1	ENST00000489638.5	Ensembl
Affymetrix Human Clariom D Assay	TC0600007595.hg.1	ENST00000489638.5	Ensembl
Affymetrix Human Clariom D Assay	TC0600007595.hg.1	ENST00000489638.5	Ensembl
Affymetrix Human Clariom D Assay	TC0600007595.hg.1	ENST00000489638.5	Ensembl
Affymetrix Human Clariom D Assay	TC0600007595.hg.1	ENST00000489638.5	Ensembl
Affymetrix Human Clariom D Assay	TC0600007595.hg.1	ENST00000489638.5	Ensembl
Affymetrix Human Clariom D Assay	TC0600007595.hg.1	ENST00000489638.5	Ensembl
Affymetrix Human Clariom D Assay	TC0600007595.hg.1	ENST00000489638.5	Ensembl
Affymetrix Human Clariom D Assay	TC0600007595.hg.1	NM_000595.3	Refseq
Affymetrix Human Clariom D Assay	TC0600007595.hg.1	NM_000595.3	Refseq
Affymetrix Human Clariom D Assay	TC0600007595.hg.1	NM_000595.3	Refseq
Affymetrix Human Clariom D Assay	TC0600007595.hg.1	NM_000595.3	Refseq
Affymetrix Human Clariom D Assay	TC0600007595.hg.1	NM_000595.3	Refseq
Affymetrix Human Clariom D Assay	TC0600007595.hg.1	NM_000595.3	Refseq
Affymetrix Human Clariom D Assay	TC0600007595.hg.1	NM_000595.3	Refseq
Affymetrix Human Clariom D Assay	TC0600007595.hg.1	NM_000595.3	Refseq
Affymetrix Human Clariom D Assay	TC0600007595.hg.1	NM_000595.3	Refseq
Affymetrix Human Clariom D Assay	TC0600007595.hg.1	NM_001159740.2	Refseq
Affymetrix Human Clariom D Assay	TC0600007595.hg.1	NM_001159740.2	Refseq
Affymetrix Human Clariom D Assay	TC0600007595.hg.1	NM_001159740.2	Refseq
Affymetrix Human Clariom D Assay	TC0600007595.hg.1	NM_001159740.2	Refseq
Affymetrix Human Clariom D Assay	TC0600007595.hg.1	NM_001159740.2	Refseq
Affymetrix Human Clariom D Assay	TC0600007595.hg.1	NM_001159740.2	Refseq
Affymetrix Human Clariom D Assay	TC0600007595.hg.1	NM_001159740.2	Refseq
Affymetrix Human Clariom D Assay	TC0600007595.hg.1	NM_001159740.2	Refseq
Affymetrix Human Clariom D Assay	TC0600007595.hg.1	NM_001159740.2	Refseq
Affymetrix Human Clariom D Assay	PSR0600151742.hg.1	ENST00000418386.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0600151742.hg.1	ENST00000454783.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0600151742.hg.1	ENST00000471842.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0600151742.hg.1	ENST00000489638.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0600151742.hg.1	NM_000595.3	Refseq
Affymetrix Human Clariom D Assay	PSR0600151742.hg.1	NM_001159740.2	Refseq
Affymetrix Human Clariom D Assay	PSR0600151742.hg.1	TC0600007595.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0600151742.hg.1	ENST00000471842.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0600151742.hg.1	ENST00000418386.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0600151742.hg.1	ENST00000454783.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0600151742.hg.1	ENST00000489638.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0600151742.hg.1	NM_000595.3	Refseq
Affymetrix Human Clariom D Assay	PSR0600151742.hg.1	NM_001159740.2	Refseq
Affymetrix Human Clariom D Assay	PSR0600151743.hg.1	ENST00000418386.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0600151743.hg.1	ENST00000454783.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0600151743.hg.1	ENST00000471842.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0600151743.hg.1	ENST00000489638.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0600151743.hg.1	NM_000595.3	Refseq
Affymetrix Human Clariom D Assay	PSR0600151743.hg.1	NM_001159740.2	Refseq
Affymetrix Human Clariom D Assay	PSR0600151743.hg.1	TC0600007595.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0600151743.hg.1	ENST00000418386.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0600151743.hg.1	ENST00000454783.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0600151743.hg.1	ENST00000471842.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0600151743.hg.1	ENST00000489638.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0600151743.hg.1	NM_000595.3	Refseq
Affymetrix Human Clariom D Assay	PSR0600151743.hg.1	NM_001159740.2	Refseq