Hs00969372_m1

• Gene Symbol: MBD2
• Gene Name: methyl-CpG binding domain protein 2
• Gene Aliases: DMTase, NY-CO-41
• Chromosome Location: Chr.18: 54151601 - 54224788 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: MBD2
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_003927.4	NP_003918.1	6 - 7	1475		107
GenBank mRNA	AF039701.1	-	5 - 6	613		107
	AF072242.1	-	6 - 7	1475		107
	AL110266.1	-	2 - 3	252		107
	BC032638.1	-	6 - 7	1316	5496721	107

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC1800008730.hg.1
This assay targets the same location as HTA transcript cluster(s) TC18000521.hg.1

• Set Membership: Ambion siRNA available, Amplicon length greater than or equal to 101, 3' Most, Mammalian Gene Collection, Homo sapiens, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene MBD2

Gene Ontology Categories:

Process(es)

negative regulation of transcription from RNA polymerase II promoter
chromatin silencing at rDNA
methylation-dependent chromatin silencing
transcription, DNA-templated
positive regulation of Wnt signaling pathway
regulation of cell proliferation
maternal behavior
ATP-dependent chromatin remodeling
cellular protein complex assembly
negative regulation of transcription, DNA-templated

Function(s)

RNA polymerase II core promoter proximal region sequence-specific DNA binding
RNA polymerase II distal enhancer sequence-specific DNA binding
satellite DNA binding
mRNA binding
protein binding
methyl-CpG binding
protein domain specific binding
nucleosomal DNA binding
siRNA binding
C2H2 zinc finger domain binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR18005418.hg.1	ENST00000256429.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR18005418.hg.1	NM_003927.4	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR18005418.hg.1	TC18000521.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR18005419.hg.1	ENST00000256429.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR18005419.hg.1	NM_003927.4	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR18005419.hg.1	TC18000521.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	TC1800008730.hg.1	ENST00000256429.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800008730.hg.1	ENST00000256429.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800008730.hg.1	ENST00000256429.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800008730.hg.1	ENST00000256429.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800008730.hg.1	ENST00000256429.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800008730.hg.1	ENST00000256429.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800008730.hg.1	ENST00000256429.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800008730.hg.1	ENST00000256429.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800008730.hg.1	ENST00000256429.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800008730.hg.1	ENST00000256429.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800008730.hg.1	ENST00000256429.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800008730.hg.1	ENST00000256429.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800008730.hg.1	ENST00000398398.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800008730.hg.1	ENST00000398398.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800008730.hg.1	ENST00000398398.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800008730.hg.1	ENST00000398398.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800008730.hg.1	ENST00000398398.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800008730.hg.1	ENST00000398398.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800008730.hg.1	ENST00000578272.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800008730.hg.1	ENST00000578272.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800008730.hg.1	ENST00000578272.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800008730.hg.1	ENST00000578272.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800008730.hg.1	ENST00000578272.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800008730.hg.1	ENST00000579025.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800008730.hg.1	ENST00000579025.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800008730.hg.1	ENST00000579025.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800008730.hg.1	ENST00000583046.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800008730.hg.1	ENST00000583046.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800008730.hg.1	ENST00000583046.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800008730.hg.1	ENST00000583046.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800008730.hg.1	ENST00000583046.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800008730.hg.1	NM_003927.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1800008730.hg.1	NM_003927.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1800008730.hg.1	NM_003927.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1800008730.hg.1	NM_003927.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1800008730.hg.1	NM_003927.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1800008730.hg.1	NM_003927.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1800008730.hg.1	NM_003927.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1800008730.hg.1	NM_003927.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1800008730.hg.1	NM_003927.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1800008730.hg.1	NM_003927.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1800008730.hg.1	NM_003927.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1800008730.hg.1	NM_003927.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1800008730.hg.1	NM_015832.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1800008730.hg.1	NM_015832.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1800008730.hg.1	NM_015832.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1800008730.hg.1	NM_015832.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1800008730.hg.1	NM_015832.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1800008730.hg.1	NM_015832.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1800008730.hg.1	NM_015832.4	Refseq
Affymetrix Human Clariom D Assay	PSR1800159856.hg.1	ENST00000256429.7	Ensembl
Affymetrix Human Clariom D Assay	PSR1800159856.hg.1	NM_003927.4	Refseq
Affymetrix Human Clariom D Assay	PSR1800159856.hg.1	TC1800008730.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1800159856.hg.1	ENST00000256429.7	Ensembl
Affymetrix Human Clariom D Assay	PSR1800159856.hg.1	NM_003927.4	Refseq
Affymetrix Human Clariom D Assay	PSR1800159857.hg.1	ENST00000256429.7	Ensembl
Affymetrix Human Clariom D Assay	PSR1800159857.hg.1	NM_003927.4	Refseq
Affymetrix Human Clariom D Assay	PSR1800159857.hg.1	TC1800008730.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1800159857.hg.1	ENST00000256429.7	Ensembl
Affymetrix Human Clariom D Assay	PSR1800159857.hg.1	NM_003927.4	Refseq
Affymetrix Human Clariom D Assay	TC1800008730.hg.1	ENST00000256429.7	Ensembl
Affymetrix Human Clariom D Assay	TC1800008730.hg.1	ENST00000256429.7	Ensembl
Affymetrix Human Clariom D Assay	TC1800008730.hg.1	ENST00000256429.7	Ensembl
Affymetrix Human Clariom D Assay	TC1800008730.hg.1	ENST00000256429.7	Ensembl
Affymetrix Human Clariom D Assay	TC1800008730.hg.1	ENST00000256429.7	Ensembl
Affymetrix Human Clariom D Assay	TC1800008730.hg.1	ENST00000256429.7	Ensembl
Affymetrix Human Clariom D Assay	TC1800008730.hg.1	ENST00000256429.7	Ensembl
Affymetrix Human Clariom D Assay	TC1800008730.hg.1	ENST00000256429.7	Ensembl
Affymetrix Human Clariom D Assay	TC1800008730.hg.1	ENST00000256429.7	Ensembl
Affymetrix Human Clariom D Assay	TC1800008730.hg.1	ENST00000256429.7	Ensembl
Affymetrix Human Clariom D Assay	TC1800008730.hg.1	ENST00000256429.7	Ensembl
Affymetrix Human Clariom D Assay	TC1800008730.hg.1	ENST00000256429.7	Ensembl
Affymetrix Human Clariom D Assay	TC1800008730.hg.1	ENST00000398398.6	Ensembl
Affymetrix Human Clariom D Assay	TC1800008730.hg.1	ENST00000398398.6	Ensembl
Affymetrix Human Clariom D Assay	TC1800008730.hg.1	ENST00000398398.6	Ensembl
Affymetrix Human Clariom D Assay	TC1800008730.hg.1	ENST00000398398.6	Ensembl
Affymetrix Human Clariom D Assay	TC1800008730.hg.1	ENST00000398398.6	Ensembl
Affymetrix Human Clariom D Assay	TC1800008730.hg.1	ENST00000398398.6	Ensembl
Affymetrix Human Clariom D Assay	TC1800008730.hg.1	ENST00000578272.1	Ensembl
Affymetrix Human Clariom D Assay	TC1800008730.hg.1	ENST00000578272.1	Ensembl
Affymetrix Human Clariom D Assay	TC1800008730.hg.1	ENST00000578272.1	Ensembl
Affymetrix Human Clariom D Assay	TC1800008730.hg.1	ENST00000578272.1	Ensembl
Affymetrix Human Clariom D Assay	TC1800008730.hg.1	ENST00000578272.1	Ensembl
Affymetrix Human Clariom D Assay	TC1800008730.hg.1	ENST00000579025.1	Ensembl
Affymetrix Human Clariom D Assay	TC1800008730.hg.1	ENST00000579025.1	Ensembl
Affymetrix Human Clariom D Assay	TC1800008730.hg.1	ENST00000579025.1	Ensembl
Affymetrix Human Clariom D Assay	TC1800008730.hg.1	ENST00000583046.1	Ensembl
Affymetrix Human Clariom D Assay	TC1800008730.hg.1	ENST00000583046.1	Ensembl
Affymetrix Human Clariom D Assay	TC1800008730.hg.1	ENST00000583046.1	Ensembl
Affymetrix Human Clariom D Assay	TC1800008730.hg.1	ENST00000583046.1	Ensembl
Affymetrix Human Clariom D Assay	TC1800008730.hg.1	ENST00000583046.1	Ensembl
Affymetrix Human Clariom D Assay	TC1800008730.hg.1	NM_003927.4	Refseq
Affymetrix Human Clariom D Assay	TC1800008730.hg.1	NM_003927.4	Refseq
Affymetrix Human Clariom D Assay	TC1800008730.hg.1	NM_003927.4	Refseq
Affymetrix Human Clariom D Assay	TC1800008730.hg.1	NM_003927.4	Refseq
Affymetrix Human Clariom D Assay	TC1800008730.hg.1	NM_003927.4	Refseq
Affymetrix Human Clariom D Assay	TC1800008730.hg.1	NM_003927.4	Refseq
Affymetrix Human Clariom D Assay	TC1800008730.hg.1	NM_003927.4	Refseq
Affymetrix Human Clariom D Assay	TC1800008730.hg.1	NM_003927.4	Refseq
Affymetrix Human Clariom D Assay	TC1800008730.hg.1	NM_003927.4	Refseq
Affymetrix Human Clariom D Assay	TC1800008730.hg.1	NM_003927.4	Refseq
Affymetrix Human Clariom D Assay	TC1800008730.hg.1	NM_003927.4	Refseq
Affymetrix Human Clariom D Assay	TC1800008730.hg.1	NM_003927.4	Refseq
Affymetrix Human Clariom D Assay	TC1800008730.hg.1	NM_015832.4	Refseq
Affymetrix Human Clariom D Assay	TC1800008730.hg.1	NM_015832.4	Refseq
Affymetrix Human Clariom D Assay	TC1800008730.hg.1	NM_015832.4	Refseq
Affymetrix Human Clariom D Assay	TC1800008730.hg.1	NM_015832.4	Refseq
Affymetrix Human Clariom D Assay	TC1800008730.hg.1	NM_015832.4	Refseq
Affymetrix Human Clariom D Assay	TC1800008730.hg.1	NM_015832.4	Refseq
Affymetrix Human Clariom D Assay	TC1800008730.hg.1	NM_015832.4	Refseq
Affymetrix Human Clariom D Assay	PSR1800159858.hg.1	ENST00000256429.7	Ensembl
Affymetrix Human Clariom D Assay	PSR1800159858.hg.1	ENST00000579025.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1800159858.hg.1	NM_003927.4	Refseq
Affymetrix Human Clariom D Assay	PSR1800159858.hg.1	TC1800008730.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1800159858.hg.1	ENST00000256429.7	Ensembl
Affymetrix Human Clariom D Assay	PSR1800159858.hg.1	ENST00000579025.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1800159858.hg.1	NM_003927.4	Refseq

Array Name	Probe IDs	Targets	Target Type
ABI Human Genome Survey Microarray Version 2.0	160697	-	-