Hs00969465_m1 Best Coverage

• Gene Symbol: AFF4
• Gene Name: AF4/FMR2 family member 4
• Gene Aliases: AF5Q31, CHOPS, MCEF
• Chromosome Location: Chr.5: 132875379 - 132963662 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: AFF4
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_014423.3	NP_055238.1	17 - 18	3414		62
	XM_005271963.4	XP_005272020.1	18 - 19	3478		62
	XM_005271964.4	XP_005272021.1	11 - 12	2126		62
	XM_006714587.3	XP_006714650.1	16 - 17	3327		62
GenBank mRNA	AF197927.1	-	17 - 18	3343		62
	AF213987.2	-	17 - 18	3071		62
	BC137226.1	-	17 - 18	3312	9021223	62
	BC144538.1	-	18 - 19	3329		62

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0500012032.hg.1
This assay targets the same location as HTA transcript cluster(s) TC05001776.hg.1

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, Mammalian Gene Collection, Recommended Assay, Homo sapiens, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene AFF4

Panther Classification:

Molecular Function -

DNA-binding transcription factor

Gene Ontology Categories:

Process(es)

regulation of transcription, DNA-templated
transcription from RNA polymerase II promoter
spermatid development

Function(s)

transcription factor activity, sequence-specific DNA binding
protein binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR05024111.hg.1	TC05001776.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR05024111.hg.1	ENST00000265343.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR05024111.hg.1	NM_014423.3	Refseq
Affymetrix Human Clariom D Assay	PSR0500183164.hg.1	ENST00000265343.9	Ensembl
Affymetrix Human Clariom D Assay	PSR0500183164.hg.1	NM_014423.3	Refseq
Affymetrix Human Clariom D Assay	PSR0500183164.hg.1	ENST00000265343.9	Ensembl
Affymetrix Human Clariom D Assay	PSR0500183164.hg.1	NM_014423.3	Refseq
Affymetrix Human Clariom D Assay	PSR0500183164.hg.1	TC0500012032.hg.1	Clariom D TC