Hs00969467_m1

• Gene Symbol: AFF4
• Gene Name: AF4/FMR2 family member 4
• Gene Aliases: AF5Q31, CHOPS, MCEF
• Chromosome Location: Chr.5: 132875379 - 132963662 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: AFF4
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_014423.3	NP_055238.1	19 - 20	3553		109
	XM_005271963.4	XP_005272020.1	20 - 21	3617		109
	XM_005271964.4	XP_005272021.1	13 - 14	2265		109
	XM_006714587.3	XP_006714650.1	18 - 19	3466		109
GenBank mRNA	AF197927.1	-	19 - 20	3482		109
	AF213987.2	-	19 - 20	3210		109
	BC137226.1	-	19 - 20	3451	9021223	109
	BC144538.1	-	20 - 21	3468		109

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0500012032.hg.1
This assay targets the same location as HTA transcript cluster(s) TC05001776.hg.1

• Set Membership: Ambion siRNA available, Amplicon length greater than or equal to 101, Mammalian Gene Collection, Homo sapiens, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene AFF4

Panther Classification:

Molecular Function -

DNA-binding transcription factor

Gene Ontology Categories:

Process(es)

regulation of transcription, DNA-templated
transcription from RNA polymerase II promoter
spermatid development

Function(s)

transcription factor activity, sequence-specific DNA binding
protein binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR05024109.hg.1	TC05001776.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR05024109.hg.1	ENST00000265343.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR05024109.hg.1	NM_014423.3	Refseq
Affymetrix Human Clariom D Assay	PSR0500183162.hg.1	ENST00000265343.9	Ensembl
Affymetrix Human Clariom D Assay	PSR0500183162.hg.1	NM_014423.3	Refseq
Affymetrix Human Clariom D Assay	PSR0500183162.hg.1	ENST00000265343.9	Ensembl
Affymetrix Human Clariom D Assay	PSR0500183162.hg.1	NM_014423.3	Refseq
Affymetrix Human Clariom D Assay	PSR0500183162.hg.1	TC0500012032.hg.1	Clariom D TC