Hs00974189_g1

• Gene Symbol: CDH23
• Gene Name: cadherin-related 23
• Gene Aliases: CDHR23, USH1D
• Chromosome Location: Chr.10: 71396934 - 71815947 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: CDH23
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001171933.1	NP_001165404.1	19 - 20	2980		67
	NM_001171934.1	NP_001165405.1	19 - 20	2980		67
	NM_022124.5	NP_071407.4	66 - 67	9773		67
	XM_006717940.3	XP_006718003.1	67 - 68	9827		67
	XM_006717942.3	XP_006718005.1	65 - 66	9761		67
	XM_011540039.2	XP_011538341.1	66 - 67	9824		67
	XM_011540042.2	XP_011538344.1	68 - 69	9737		67
	XM_011540043.2	XP_011538345.1	67 - 68	9827		67
	XM_011540044.2	XP_011538346.1	67 - 68	9468		67
	XM_011540045.2	XP_011538347.1	67 - 68	9827		67
	XM_011540046.2	XP_011538348.1	62 - 63	9262		67
	XM_011540047.2	XP_011538349.1	56 - 57	8562		67
	XM_011540052.2	XP_011538354.1	39 - 40	6102		67
	XM_017016499.1	XP_016871988.1	66 - 67	9773		67
	XM_017016500.1	XP_016871989.1	66 - 67	9701		67
	XM_017016501.1	XP_016871990.1	46 - 47	7329		67
	XM_017016502.1	XP_016871991.1	46 - 47	7517		67
	XM_017016503.1	XP_016871992.1	36 - 37	5505		67
	XM_017016504.1	XP_016871993.1	30 - 31	5290		67
	XM_017016505.1	XP_016871994.1	30 - 31	5321		67
	XM_017016506.1	XP_016871995.1	29 - 30	4760		67
	XM_017016507.1	XP_016871996.1	23 - 24	3582		67
	XM_017016508.1	XP_016871997.1	19 - 20	3035		67
GenBank mRNA	AB053445.1	-	18 - 19	2919		67
	AF312024.1	-	65 - 66	9383		67
	AY010111.2	-	65 - 66	9383		67
	AY563165.1	-	19 - 20	2980		67
	AY563166.1	-	19 - 20	2980		67

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC1000007959.hg.1
This assay targets the same location as HTA transcript cluster(s) TC10000442.hg.1

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, Detect Genomic DNA, Homo sapiens, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene CDH23

Panther Classification:

Molecular Function -

cadherin

Gene Ontology Categories:

Process(es)

calcium ion transport
homophilic cell adhesion via plasma membrane adhesion molecules
visual perception
sensory perception of sound
locomotory behavior
calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules
photoreceptor cell maintenance
response to stimulus
sensory perception of light stimulus
equilibrioception
regulation of cytosolic calcium ion concentration
inner ear receptor stereocilium organization

Function(s)

calcium ion binding
protein binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR10005264.hg.1	ENST00000224721.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR10005264.hg.1	ENST00000398788.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR10005264.hg.1	ENST00000398855.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR10005264.hg.1	ENST00000398860.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR10005264.hg.1	NM_001171933.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR10005264.hg.1	NM_001171934.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR10005264.hg.1	NM_001171935.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR10005264.hg.1	NM_001171936.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR10005264.hg.1	NM_022124.5	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR10005264.hg.1	TC10000442.hg.1	HTA TC
Affymetrix Human Clariom D Assay	PSR1000154096.hg.1	ENST00000224721.10	Ensembl
Affymetrix Human Clariom D Assay	PSR1000154096.hg.1	ENST00000398788.4	Ensembl
Affymetrix Human Clariom D Assay	PSR1000154096.hg.1	ENST00000475158.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1000154096.hg.1	ENST00000619887.4	Ensembl
Affymetrix Human Clariom D Assay	PSR1000154096.hg.1	ENST00000622827.4	Ensembl
Affymetrix Human Clariom D Assay	PSR1000154096.hg.1	NM_001171933.1	Refseq
Affymetrix Human Clariom D Assay	PSR1000154096.hg.1	NM_001171934.1	Refseq
Affymetrix Human Clariom D Assay	PSR1000154096.hg.1	NM_001171935.1	Refseq
Affymetrix Human Clariom D Assay	PSR1000154096.hg.1	NM_001171936.1	Refseq
Affymetrix Human Clariom D Assay	PSR1000154096.hg.1	NM_022124.5	Refseq
Affymetrix Human Clariom D Assay	PSR1000154096.hg.1	ENST00000224721.10	Ensembl
Affymetrix Human Clariom D Assay	PSR1000154096.hg.1	ENST00000398788.4	Ensembl
Affymetrix Human Clariom D Assay	PSR1000154096.hg.1	ENST00000475158.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1000154096.hg.1	ENST00000619887.4	Ensembl
Affymetrix Human Clariom D Assay	PSR1000154096.hg.1	ENST00000622827.4	Ensembl
Affymetrix Human Clariom D Assay	PSR1000154096.hg.1	NM_001171933.1	Refseq
Affymetrix Human Clariom D Assay	PSR1000154096.hg.1	NM_001171934.1	Refseq
Affymetrix Human Clariom D Assay	PSR1000154096.hg.1	NM_001171935.1	Refseq
Affymetrix Human Clariom D Assay	PSR1000154096.hg.1	NM_001171936.1	Refseq
Affymetrix Human Clariom D Assay	PSR1000154096.hg.1	NM_022124.5	Refseq
Affymetrix Human Clariom D Assay	PSR1000154096.hg.1	TC1000007959.hg.1	Clariom D TC