Hs00977216_m1

• Gene Symbol: LINC00474
• Gene Name: long intergenic non-protein coding RNA 474
• Gene Aliases: C9orf27, EST-YD1
• Chromosome Location: Chr.9: 115888265 - 115925098 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: LINC00474
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_024032.1		2 - 3	344		112
GenBank mRNA	AB021923.1	-	2 - 3	454		112
	BC104240.1	-	2 - 3	344		112
	BC104241.1	-	2 - 3	343		112
	BC112996.1	-	2 - 3	344		112
	BC112997.1	-	2 - 3	344		112
	BC120871.2	-	1 - 2			112
	BC128039.1	-	2 - 3	344		112

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	BX116645.1	-	2 - 3	346		Chr. 9 - 115888162 - 115925090 [-] on Build GRCh38	112

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	uncharacterized LOC101928775	LOC101928775		-144.0kb	Sense	Chr. 9 - 115739670 - 115744239 on NCBI Build GRCh38
Downstream	pappalysin 1	PAPPA	ASBABP2, DIPLA1, IGFBP-4ase, PAPA, PAPP-A, PAPPA1	249.2kb	Anti-sense	Chr. 9 - 116153752 - 116402321 on NCBI Build GRCh38

More Information

• Set Membership: Amplicon length greater than or equal to 101, Mammalian Gene Collection, Homo sapiens, Probe spans exons

Gene Ontology Categories:

Process(es)

biological_process

Function(s)

molecular_function

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	TC0900011318.hg.1	ENST00000374014.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900011318.hg.1	ENST00000374014.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900011318.hg.1	ENST00000374014.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900011318.hg.1	ENST00000374014.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900011318.hg.1	ENST00000374014.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900011318.hg.1	NR_024032.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0900011318.hg.1	NR_024032.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0900011318.hg.1	NR_024032.1	Refseq
Affymetrix Human Clariom D Assay	TC0900011318.hg.1	ENST00000374014.3	Ensembl
Affymetrix Human Clariom D Assay	TC0900011318.hg.1	ENST00000374014.3	Ensembl
Affymetrix Human Clariom D Assay	TC0900011318.hg.1	ENST00000374014.3	Ensembl
Affymetrix Human Clariom D Assay	TC0900011318.hg.1	ENST00000374014.3	Ensembl
Affymetrix Human Clariom D Assay	TC0900011318.hg.1	ENST00000374014.3	Ensembl
Affymetrix Human Clariom D Assay	TC0900011318.hg.1	NR_024032.1	Refseq
Affymetrix Human Clariom D Assay	TC0900011318.hg.1	NR_024032.1	Refseq
Affymetrix Human Clariom D Assay	TC0900011318.hg.1	NR_024032.1	Refseq