Hs00981731_g1

• Gene Symbol: TPR
• Gene Name: translocated promoter region, nuclear basket protein
• Gene Aliases: -
• Chromosome Location: Chr.1: 186311652 - 186375325 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: TPR
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_003292.2	NP_003283.2	35 - 36	5267		66
GenBank mRNA	U69668.1	-	35 - 36	5058		66
	X66397.1	-	35 - 36	5267		66

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0100016709.hg.1
This assay targets the same location as HTA transcript cluster(s) TC01003636.hg.1

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, Protein Kinase, Detect Genomic DNA, Homo sapiens, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene TPR

Panther Classification:

Molecular Function -

primary active transporter

Gene Ontology Categories:

Process(es)

negative regulation of transcription from RNA polymerase II promoter
MAPK import into nucleus
RNA import into nucleus
RNA export from nucleus
mRNA export from nucleus
tRNA export from nucleus
protein import into nucleus
protein export from nucleus
nuclear pore organization
mitotic nuclear division
mitotic nuclear envelope disassembly
mitotic spindle assembly checkpoint
biological_process
regulation of mRNA export from nucleus
regulation of glucose transport
regulation of mitotic sister chromatid separation
viral process
protein sumoylation
viral transcription
gene silencing by RNA
positive regulation of heterochromatin assembly
regulation of protein stability
mRNA export from nucleus in response to heat stress
cellular response to heat
cellular response to interferon-alpha
regulation of protein import into nucleus
positive regulation of protein import into nucleus
nuclear matrix organization
negative regulation of translational initiation
regulation of protein export from nucleus
positive regulation of protein export from nucleus
negative regulation of RNA export from nucleus
nuclear pore complex assembly
cell division
response to epidermal growth factor
intracellular transport of virus
positive regulation of mitotic cell cycle spindle assembly checkpoint
positive regulation of intracellular protein transport
regulation of cellular response to heat
regulation of mitotic spindle assembly

Function(s)

molecular_function
chromatin binding
mRNA binding
transporter activity
nucleocytoplasmic transporter activity
protein binding
tubulin binding
heat shock protein binding
protein homodimerization activity
protein anchor
poly(A) RNA binding
mitogen-activated protein kinase binding
dynein complex binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR01055888.hg.1	TC01003636.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR01055888.hg.1	ENST00000367478.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR01055888.hg.1	NM_003292.2	Refseq
Affymetrix Human Clariom D Assay	PSR0100226744.hg.1	ENST00000367478.8	Ensembl
Affymetrix Human Clariom D Assay	PSR0100226744.hg.1	NM_003292.2	Refseq
Affymetrix Human Clariom D Assay	PSR0100226744.hg.1	ENST00000367478.8	Ensembl
Affymetrix Human Clariom D Assay	PSR0100226744.hg.1	NM_003292.2	Refseq
Affymetrix Human Clariom D Assay	PSR0100226744.hg.1	TC0100016709.hg.1	Clariom D TC