Hs00984414_g1

• Gene Symbol: PTPN3
• Gene Name: protein tyrosine phosphatase, non-receptor type 3
• Gene Aliases: PTP-H1, PTPH1
• Chromosome Location: Chr.9: 109375694 - 109538395 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: PTPN3
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001145368.1	NP_001138840.1	19 - 20	2021		125
	NM_001145369.1	NP_001138841.1	15 - 16	4205		125
	NM_001145370.1	NP_001138842.1	14 - 15	4070		125
	NM_001145371.1	NP_001138843.1	10 - 11	1639		125
	NM_001145372.1	NP_001138844.1	9 - 10	1504		125
	NM_002829.3	NP_002820.3	20 - 21	2156		125
	NR_026918.1		7 - 8	926		125
	XM_006717197.3	XP_006717260.1	20 - 21	2265		125
	XM_006717199.3	XP_006717262.1	20 - 21	2290		125
	XM_006717201.3	XP_006717264.1	19 - 20	2097		125
	XM_006717202.3	XP_006717265.1	17 - 18	1859		125
	XM_006717203.3	XP_006717266.1	17 - 18	1818		125
	XM_006717204.3	XP_006717267.1	20 - 21	2192		125
	XM_011518888.2	XP_011517190.1	20 - 21	2226		125
	XM_011518889.2	XP_011517191.1	20 - 21	2896		125
	XM_017014955.1	XP_016870444.1	20 - 21	2248		125
	XM_017014956.1	XP_016870445.1	18 - 19	1969		125
	XM_017014957.1	XP_016870446.1	19 - 20	2057		125
GenBank mRNA	AK295875.1	-	18 - 19	1941		125
	AK296388.1	-	11 - 12	1565		125
	AK303608.1	-	7 - 8	926		125
	AK304434.1	-	19 - 20	2021		125
	AK308349.1	-	7 - 8	889		125
	AK316066.1	-	19 - 20	2021		125
	AK316118.1	-	9 - 10	1430		125
	BC033716.1	-	2 - 3	182		125
	BC126117.1	-	19 - 20	2066	8991833	125
	BC143848.1	-	18 - 19	1931	9052363	125
	BX648253.1	-	14 - 15	4071		125
	BX648735.1	-	15 - 16	2640		125
	CR749204.1	-	8 - 9	1083		125
	DQ104439.1	-	19 - 20	2044		125
	M64572.1	-	19 - 20	2067		125
	S39392.1	-	12 - 13	1467		125

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0900011163.hg.1
This assay targets the same location as HTA transcript cluster(s) TC09001468.hg.1

• Set Membership: Ambion siRNA available, Amplicon length greater than or equal to 101, Protein Phosphatase, Mammalian Gene Collection, Detect Genomic DNA, Homo sapiens, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene PTPN3

Gene Ontology Categories:

Process(es)

protein dephosphorylation
peptidyl-tyrosine dephosphorylation
negative regulation of mitotic cell cycle
negative regulation of membrane protein ectodomain proteolysis
liver regeneration
regulation of membrane depolarization during action potential
regulation of sodium ion transmembrane transporter activity

Function(s)

phosphotyrosine binding
protein tyrosine phosphatase activity
protein binding
cytoskeletal protein binding
sodium channel regulator activity
ATPase binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR09018148.hg.1	TC09001468.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR09018148.hg.1	ENST00000262539.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR09018148.hg.1	ENST00000374541.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR09018148.hg.1	ENST00000394827.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR09018148.hg.1	ENST00000394831.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR09018148.hg.1	ENST00000412145.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR09018148.hg.1	ENST00000446349.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR09018148.hg.1	ENST00000497739.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR09018148.hg.1	NM_001145368.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR09018148.hg.1	NM_001145369.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR09018148.hg.1	NM_001145370.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR09018148.hg.1	NM_001145371.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR09018148.hg.1	NM_001145372.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR09018148.hg.1	NM_002829.3	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR09018148.hg.1	NR_026918.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900175949.hg.1	ENST00000262539.7	Ensembl
Affymetrix Human Clariom D Assay	PSR0900175949.hg.1	ENST00000374541.3	Ensembl
Affymetrix Human Clariom D Assay	PSR0900175949.hg.1	ENST00000412145.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0900175949.hg.1	ENST00000446349.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0900175949.hg.1	ENST00000497739.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0900175949.hg.1	NM_001145368.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900175949.hg.1	NM_001145369.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900175949.hg.1	NM_001145370.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900175949.hg.1	NM_001145371.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900175949.hg.1	NM_001145372.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900175949.hg.1	NM_002829.3	Refseq
Affymetrix Human Clariom D Assay	PSR0900175949.hg.1	NR_026918.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900175949.hg.1	ENST00000262539.7	Ensembl
Affymetrix Human Clariom D Assay	PSR0900175949.hg.1	ENST00000374541.3	Ensembl
Affymetrix Human Clariom D Assay	PSR0900175949.hg.1	ENST00000412145.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0900175949.hg.1	ENST00000446349.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0900175949.hg.1	ENST00000497739.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0900175949.hg.1	NM_001145368.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900175949.hg.1	NM_001145369.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900175949.hg.1	NM_001145370.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900175949.hg.1	NM_001145371.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900175949.hg.1	NM_001145372.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900175949.hg.1	NM_002829.3	Refseq
Affymetrix Human Clariom D Assay	PSR0900175949.hg.1	NR_026918.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900175949.hg.1	TC0900011163.hg.1	Clariom D TC