Hs00985781_m1 Best Coverage

• Gene Symbol: ACOD1
• Gene Name: aconitate decarboxylase 1
• Gene Aliases: CAD, IRG1
• Chromosome Location: Chr.13: 76948559 - 76958642 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: ACOD1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001258406.1	NP_001245335.1	2 - 3	260		139
GenBank mRNA	DN831390.1	-	2 - 3	254		139

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC1300007546.hg.1

• Set Membership: Amplicon length greater than or equal to 101, Recommended Assay, Homo sapiens, 1700, Inventoried, Probe spans exons

Panther Classification:

Molecular Function -

dehydratase

Gene Ontology Categories:

Process(es)

positive regulation of antimicrobial humoral response
defense response
inflammatory response
embryo implantation
metabolic process
negative regulation of NF-kappaB transcription factor activity
negative regulation of type I interferon production
negative regulation of toll-like receptor 2 signaling pathway
negative regulation of toll-like receptor 4 signaling pathway
cellular response to interferon-beta
negative regulation of innate immune response
negative regulation of inflammatory response
cellular response to molecule of bacterial origin
cellular response to lipopolysaccharide
cellular response to interferon-gamma
cellular response to interleukin-1
cellular response to tumor necrosis factor
cellular response to progesterone stimulus
tolerance induction to lipopolysaccharide
positive regulation of reactive oxygen species metabolic process

Function(s)

aconitate decarboxylase activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent G4851A SurePrint G3 Hmn GE 8x60K Microarray	53414	-	-
Agilent Whole Human Genome Microarray 4x44K v2	A_33_P3319925	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Gene 1.0 ST Array	XM_001133269_at	-	-
Affymetrix Human Gene 1.0 ST Array	7969485	-	-
Affymetrix Human Gene 1.0 ST Array	7969484	-	-
Affymetrix Human Gene 1.0 ST Array	7969487	-	-
Affymetrix Human Gene 1.0 ST Array	7969486	-	-
Affymetrix Human Gene 1.0 ST Array	7969483	-	-
Affymetrix Human Gene 1.1 ST Array	7969482	-	-
Affymetrix Human Transcriptome Array 2.0	TC1300007546.hg.1	ENST00000377462.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1300007546.hg.1	ENST00000377462.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1300007546.hg.1	ENST00000377462.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1300007546.hg.1	ENST00000377462.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1300007546.hg.1	ENST00000377462.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1300007546.hg.1	ENST00000377462.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1300007546.hg.1	ENST00000449753.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1300007546.hg.1	ENST00000449753.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1300007546.hg.1	ENST00000449753.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1300007546.hg.1	ENST00000449753.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1300007546.hg.1	ENST00000449753.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1300007546.hg.1	NM_001258406.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1300007546.hg.1	NM_001258406.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1300007546.hg.1	NM_001258406.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1300007546.hg.1	NM_001258406.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1300007546.hg.1	NM_001258406.1	Refseq
Affymetrix Human Clariom D Assay	PSR1300150984.hg.1	ENST00000377462.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1300150984.hg.1	ENST00000449753.2	Ensembl
Affymetrix Human Clariom D Assay	PSR1300150984.hg.1	NM_001258406.1	Refseq
Affymetrix Human Clariom D Assay	PSR1300150984.hg.1	ENST00000377462.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1300150984.hg.1	ENST00000449753.2	Ensembl
Affymetrix Human Clariom D Assay	PSR1300150984.hg.1	NM_001258406.1	Refseq
Affymetrix Human Clariom D Assay	PSR1300150984.hg.1	TC1300007546.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	TC1300007546.hg.1	ENST00000377462.5	Ensembl
Affymetrix Human Clariom D Assay	TC1300007546.hg.1	ENST00000377462.5	Ensembl
Affymetrix Human Clariom D Assay	TC1300007546.hg.1	ENST00000377462.5	Ensembl
Affymetrix Human Clariom D Assay	TC1300007546.hg.1	ENST00000377462.5	Ensembl
Affymetrix Human Clariom D Assay	TC1300007546.hg.1	ENST00000377462.5	Ensembl
Affymetrix Human Clariom D Assay	TC1300007546.hg.1	ENST00000377462.5	Ensembl
Affymetrix Human Clariom D Assay	TC1300007546.hg.1	ENST00000449753.2	Ensembl
Affymetrix Human Clariom D Assay	TC1300007546.hg.1	ENST00000449753.2	Ensembl
Affymetrix Human Clariom D Assay	TC1300007546.hg.1	ENST00000449753.2	Ensembl
Affymetrix Human Clariom D Assay	TC1300007546.hg.1	ENST00000449753.2	Ensembl
Affymetrix Human Clariom D Assay	TC1300007546.hg.1	ENST00000449753.2	Ensembl
Affymetrix Human Clariom D Assay	TC1300007546.hg.1	NM_001258406.1	Refseq
Affymetrix Human Clariom D Assay	TC1300007546.hg.1	NM_001258406.1	Refseq
Affymetrix Human Clariom D Assay	TC1300007546.hg.1	NM_001258406.1	Refseq
Affymetrix Human Clariom D Assay	TC1300007546.hg.1	NM_001258406.1	Refseq
Affymetrix Human Clariom D Assay	TC1300007546.hg.1	NM_001258406.1	Refseq
Human Genome U133 Plus 2.0 Array	240287_PM_at	-	-
Human Genome U133 Plus 2.0 Array	240287_at	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	240287_at5	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	240287_at10	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	240287_at7	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	240287_at11	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	240287_at6	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	240287_at2	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	240287_at1	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	240287_at9	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	240287_at3	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	240287_at4	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	240287_at8	-	-
Human Genome U95 Set	91636_at	-	-
Human Genome U95 Set	91636_PM_at	-	-
Human Genome U133 Set	240287_PM_at	-	-
Human Genome U133 Set	240287_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Human Genome Survey Microarray Version 2.0	131561	-	-

Array Name	Probe IDs	Targets	Target Type
HumanHT-12 v4 Expression BeadChip	ILMN_1838319	-	-
HumanHT-12 v4 Expression BeadChip	ILMN_3193271	-	-
HumanHT-12 V4.0 expression beadchip	ILMN_1838319	-	-
HumanHT-12 V4.0 expression beadchip	ILMN_3193271	-	-
Illumina HumanHT-12 V3.0 expression beadchip	ILMN_1838319	-	-
Illumina HumanWG-6_V2_0_R2	ILMN_1838319	-	-