Hs00989195_g1

• Gene Symbol: APOA1
• Gene Name: apolipoprotein A1
• Gene Aliases: apo(a)
• Chromosome Location: Chr.11: 116835751 - 116837950 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: APOA1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_000039.2	NP_000030.1	1 - 2	352		70
	NM_001318021.1	NP_001304950.1	1 - 2	352		70
GenBank mRNA	BC110286.1	-	1 - 2	47	5164525	70
	CD558050.1	-	1 - 2	352		70

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC1100012423.hg
This assay targets the same location as HTA transcript cluster(s) TC11002328.hg

Additional Information:

This assay is in the 5'UTR region of the BC110286.1,NM_000039.2,NM_001318021.1 transcripts.

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, Mammalian Gene Collection, Detect Genomic DNA, Homo sapiens, 1700, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene APOA1

Panther Classification:

Molecular Function -

apolipoprotein

Gene Ontology Categories:

Process(es)

retinoid metabolic process
regulation of protein phosphorylation
endothelial cell proliferation
platelet degranulation
negative regulation of cytokine secretion involved in immune response
phospholipid metabolic process
phosphatidylcholine biosynthetic process
cholesterol biosynthetic process
receptor-mediated endocytosis
transforming growth factor beta receptor signaling pathway
G-protein coupled receptor signaling pathway
integrin-mediated signaling pathway
response to nutrient
cholesterol metabolic process
glucocorticoid metabolic process
negative regulation of tumor necrosis factor-mediated signaling pathway
positive regulation of cholesterol esterification
positive regulation of triglyceride catabolic process
negative regulation of very-low-density lipoprotein particle remodeling
peripheral nervous system axon regeneration
protein oxidation
peptidyl-methionine modification
triglyceride catabolic process
lipid storage
regulation of intestinal cholesterol absorption
cholesterol transport
adrenal gland development
organ regeneration
neuron projection regeneration
regulation of Cdc42 protein signal transduction
cholesterol efflux
phospholipid efflux
negative regulation of heterotypic cell-cell adhesion
high-density lipoprotein particle remodeling
high-density lipoprotein particle assembly
high-density lipoprotein particle clearance
positive regulation of Rho protein signal transduction
lipoprotein metabolic process
lipoprotein biosynthetic process
response to drug
cholesterol homeostasis
blood vessel endothelial cell migration
response to estrogen
reverse cholesterol transport
cellular protein metabolic process
positive regulation of fatty acid biosynthetic process
negative regulation of interleukin-1 beta secretion
negative regulation of inflammatory response
protein stabilization
negative chemotaxis
positive regulation of lipoprotein lipase activity
vitamin transport
positive regulation of hydrolase activity
positive regulation of stress fiber assembly
transmembrane transport
phospholipid homeostasis
negative regulation of lipase activity
negative regulation of cell adhesion molecule production
negative regulation of response to cytokine stimulus
triglyceride homeostasis
ERK1 and ERK2 cascade
cholesterol import
positive regulation of substrate adhesion-dependent cell spreading

Function(s)

beta-amyloid binding
protein binding
phospholipid binding
phospholipid transporter activity
high-density lipoprotein particle binding
cholesterol binding
cholesterol transporter activity
enzyme binding
phosphatidylcholine binding
apolipoprotein receptor binding
apolipoprotein A-I receptor binding
identical protein binding
chemorepellent activity
lipase inhibitor activity
phosphatidylcholine-sterol O-acyltransferase activator activity
high-density lipoprotein particle receptor binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	TC1100012423.hg.1	ENST00000236850.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100012423.hg.1	ENST00000236850.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100012423.hg.1	ENST00000236850.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100012423.hg.1	ENST00000236850.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100012423.hg.1	ENST00000236850.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100012423.hg.1	ENST00000359492.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100012423.hg.1	ENST00000359492.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100012423.hg.1	ENST00000359492.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100012423.hg.1	ENST00000359492.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100012423.hg.1	ENST00000359492.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100012423.hg.1	ENST00000375320.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100012423.hg.1	ENST00000375320.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100012423.hg.1	ENST00000375320.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100012423.hg.1	ENST00000375320.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100012423.hg.1	ENST00000375320.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100012423.hg.1	ENST00000375320.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100012423.hg.1	ENST00000375323.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100012423.hg.1	ENST00000375323.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100012423.hg.1	ENST00000375323.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100012423.hg.1	ENST00000375323.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100012423.hg.1	ENST00000375323.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100012423.hg.1	ENST00000375323.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100012423.hg.1	ENST00000375323.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100012423.hg.1	ENST00000375329.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100012423.hg.1	ENST00000375329.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100012423.hg.1	ENST00000375329.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100012423.hg.1	ENST00000375329.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100012423.hg.1	ENST00000375329.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100012423.hg.1	ENST00000375329.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100012423.hg.1	NM_000039.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100012423.hg.1	NM_000039.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100012423.hg.1	NM_000039.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100012423.hg.1	NM_000039.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR11027812.hg.1	ENST00000236850.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR11027812.hg.1	ENST00000359492.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR11027812.hg.1	ENST00000375320.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR11027812.hg.1	ENST00000375323.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR11027812.hg.1	ENST00000375329.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR11027812.hg.1	NM_000039.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR11027812.hg.1	TC11002328.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR11027814.hg.1	ENST00000236850.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR11027814.hg.1	ENST00000359492.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR11027814.hg.1	ENST00000375320.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR11027814.hg.1	ENST00000375323.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR11027814.hg.1	ENST00000375329.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR11027814.hg.1	NM_000039.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR11027814.hg.1	TC11002328.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR11027813.hg.1	ENST00000236850.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR11027813.hg.1	ENST00000359492.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR11027813.hg.1	ENST00000375320.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR11027813.hg.1	ENST00000375323.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR11027813.hg.1	NM_000039.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR11027813.hg.1	TC11002328.hg.1	HTA TC
Affymetrix Human Clariom D Assay	TC1100012423.hg.1	ENST00000236850.4	Ensembl
Affymetrix Human Clariom D Assay	TC1100012423.hg.1	ENST00000236850.4	Ensembl
Affymetrix Human Clariom D Assay	TC1100012423.hg.1	ENST00000236850.4	Ensembl
Affymetrix Human Clariom D Assay	TC1100012423.hg.1	ENST00000236850.4	Ensembl
Affymetrix Human Clariom D Assay	TC1100012423.hg.1	ENST00000236850.4	Ensembl
Affymetrix Human Clariom D Assay	TC1100012423.hg.1	ENST00000359492.6	Ensembl
Affymetrix Human Clariom D Assay	TC1100012423.hg.1	ENST00000359492.6	Ensembl
Affymetrix Human Clariom D Assay	TC1100012423.hg.1	ENST00000359492.6	Ensembl
Affymetrix Human Clariom D Assay	TC1100012423.hg.1	ENST00000359492.6	Ensembl
Affymetrix Human Clariom D Assay	TC1100012423.hg.1	ENST00000359492.6	Ensembl
Affymetrix Human Clariom D Assay	TC1100012423.hg.1	ENST00000375320.5	Ensembl
Affymetrix Human Clariom D Assay	TC1100012423.hg.1	ENST00000375320.5	Ensembl
Affymetrix Human Clariom D Assay	TC1100012423.hg.1	ENST00000375320.5	Ensembl
Affymetrix Human Clariom D Assay	TC1100012423.hg.1	ENST00000375320.5	Ensembl
Affymetrix Human Clariom D Assay	TC1100012423.hg.1	ENST00000375320.5	Ensembl
Affymetrix Human Clariom D Assay	TC1100012423.hg.1	ENST00000375320.5	Ensembl
Affymetrix Human Clariom D Assay	TC1100012423.hg.1	ENST00000375323.5	Ensembl
Affymetrix Human Clariom D Assay	TC1100012423.hg.1	ENST00000375323.5	Ensembl
Affymetrix Human Clariom D Assay	TC1100012423.hg.1	ENST00000375323.5	Ensembl
Affymetrix Human Clariom D Assay	TC1100012423.hg.1	ENST00000375323.5	Ensembl
Affymetrix Human Clariom D Assay	TC1100012423.hg.1	ENST00000375323.5	Ensembl
Affymetrix Human Clariom D Assay	TC1100012423.hg.1	ENST00000375323.5	Ensembl
Affymetrix Human Clariom D Assay	TC1100012423.hg.1	ENST00000375323.5	Ensembl
Affymetrix Human Clariom D Assay	TC1100012423.hg.1	ENST00000375329.6	Ensembl
Affymetrix Human Clariom D Assay	TC1100012423.hg.1	ENST00000375329.6	Ensembl
Affymetrix Human Clariom D Assay	TC1100012423.hg.1	ENST00000375329.6	Ensembl
Affymetrix Human Clariom D Assay	TC1100012423.hg.1	ENST00000375329.6	Ensembl
Affymetrix Human Clariom D Assay	TC1100012423.hg.1	ENST00000375329.6	Ensembl
Affymetrix Human Clariom D Assay	TC1100012423.hg.1	ENST00000375329.6	Ensembl
Affymetrix Human Clariom D Assay	TC1100012423.hg.1	NM_000039.2	Refseq
Affymetrix Human Clariom D Assay	TC1100012423.hg.1	NM_000039.2	Refseq
Affymetrix Human Clariom D Assay	TC1100012423.hg.1	NM_000039.2	Refseq
Affymetrix Human Clariom D Assay	TC1100012423.hg.1	NM_000039.2	Refseq
Affymetrix Human Clariom D Assay	PSR1100195393.hg.1	ENST00000236850.4	Ensembl
Affymetrix Human Clariom D Assay	PSR1100195393.hg.1	ENST00000359492.6	Ensembl
Affymetrix Human Clariom D Assay	PSR1100195393.hg.1	ENST00000375320.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1100195393.hg.1	ENST00000375323.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1100195393.hg.1	ENST00000375329.6	Ensembl
Affymetrix Human Clariom D Assay	PSR1100195393.hg.1	NM_000039.2	Refseq
Affymetrix Human Clariom D Assay	PSR1100195393.hg.1	ENST00000236850.4	Ensembl
Affymetrix Human Clariom D Assay	PSR1100195393.hg.1	ENST00000359492.6	Ensembl
Affymetrix Human Clariom D Assay	PSR1100195393.hg.1	ENST00000375320.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1100195393.hg.1	ENST00000375323.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1100195393.hg.1	ENST00000375329.6	Ensembl
Affymetrix Human Clariom D Assay	PSR1100195393.hg.1	NM_000039.2	Refseq
Affymetrix Human Clariom D Assay	PSR1100195393.hg.1	TC1100012423.hg.1	Clariom D TC

Array Name	Probe IDs	Targets	Target Type
ABI Human Genome Survey Microarray Version 2.0	161897	-	-