Hs00989479_g1

• Gene Symbol: CARMIL1
• Gene Name: capping protein regulator and myosin 1 linker 1
• Gene Aliases: CARMIL, CARMIL1a, LRRC16, LRRC16A, dJ501N12.1, dJ501N12.5
• Chromosome Location: Chr.6: 25279428 - 25620530 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: CARMIL1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001173977.1	NP_001167448.1	30 - 31	3175		62
	NM_017640.5	NP_060110.4	30 - 31	3175		62
	XM_005249218.1	XP_005249275.1	30 - 31	3175		62
	XM_017011008.1	XP_016866497.1	32 - 33	3205		62
	XM_017011009.1	XP_016866498.1	32 - 33	3205		62
	XM_017011010.1	XP_016866499.1	31 - 32	3193		62
	XM_017011011.1	XP_016866500.1	31 - 32	3187		62
	XM_017011012.1	XP_016866501.1	32 - 33	3205		62
	XM_017011013.1	XP_016866502.1	31 - 32	3187		62
	XM_017011014.1	XP_016866503.1	31 - 32	3145		62
	XM_017011015.1	XP_016866504.1	32 - 33	3205		62
	XM_017011016.1	XP_016866505.1	31 - 32	3187		62
GenBank mRNA	AK000055.1	-	5 - 6	512		62
	AK225208.1	-	5 - 6	512		62
	BC140770.1	-	30 - 31	2956	9021638	62
	BG978388.1	-	1 - 2			62
	FJ009082.1	-	30 - 31	2807		62

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0600007231.hg.1
This assay targets the same location as HTA transcript cluster(s) TC06000153.hg.1

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, Mammalian Gene Collection, Detect Genomic DNA, Homo sapiens, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene CARMIL1

Gene Ontology Categories:

Process(es)

actin filament organization
blood coagulation
cell migration
lamellipodium assembly
positive regulation of cell migration
positive regulation of actin filament polymerization
ruffle organization
macropinocytosis
urate metabolic process
positive regulation of stress fiber assembly
barbed-end actin filament uncapping
actin filament network formation
positive regulation of substrate adhesion-dependent cell spreading
positive regulation of lamellipodium organization
negative regulation of barbed-end actin filament capping

Function(s)

protein binding
protein complex binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR06001571.hg.1	TC06000153.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR06001571.hg.1	ENST00000329474.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR06001571.hg.1	ENST00000399313.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR06001571.hg.1	NM_001173977.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR06001571.hg.1	NM_017640.5	Refseq
Affymetrix Human Clariom D Assay	PSR0600149122.hg.1	ENST00000329474.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0600149122.hg.1	NM_001173977.1	Refseq
Affymetrix Human Clariom D Assay	PSR0600149122.hg.1	NM_017640.5	Refseq
Affymetrix Human Clariom D Assay	PSR0600149122.hg.1	ENST00000329474.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0600149122.hg.1	NM_001173977.1	Refseq
Affymetrix Human Clariom D Assay	PSR0600149122.hg.1	NM_017640.5	Refseq
Affymetrix Human Clariom D Assay	PSR0600149122.hg.1	TC0600007231.hg.1	Clariom D TC