Name: [Hs00991371_g1] [CDIPT-AS1]
Creator: Thermo Fisher Scientific
Keywords: [CDIPT-AS1] Assay, [CDIPT antisense RNA 1 (head to head)] Assay

Assay Details

Gene Symbol: CDIPT-AS1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_015396.1		2 - 3	262		60
RefSeq	NR_024370.1		2 - 3	139		60
GenBank mRNA	AK131031.1	-	2 - 3	262		60
	BC070380.1	-	2 - 3	244		60
	BM006535.1	-	2 - 3	140		60

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	Transcript Location	Amplicon Length
GenBankmRNA	CK300470.1	-	4 - 5		Chr. 16 - 29864339 - 29868050 [-] on Build GRCh38	60
GenBankmRNA	BQ189470.1	-	2 - 3	137	Chr. 16 - 29863685 - 29867921 [+] on Build GRCh38	60
GenBankmRNA	BM007084.1	-	4 - 5		Chr. 16 - 29863683 - 29867989 [-] on Build GRCh38	60
GenBankmRNA	BI825161.1	-	2 - 3	236	Chr. 16 - 29863860 - 29868048 [+] on Build GRCh38	60
GenBankmRNA	BX090036.1	-	2 - 3	230	Chr. 16 - 29863866 - 29865415 [+] on Build GRCh38	60
GenBankmRNA	BM909113.1	-		229	Chr. - - [-] on Build	60
GenBankmRNA	BM727326.1	-	2 - 3	137	Chr. 16 - 29863685 - 29867942 [+] on Build GRCh38	60
GenBankmRNA	BM681704.1	-	4 - 5		Chr. 16 - 29864303 - 29868050 [-] on Build GRCh38	60
GenBankmRNA	HY042407.1	-	2 - 3	261	Chr. 16 - 29863836 - 29865237 [+] on Build GRCh38	60

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	CDP-diacylglycerol--inositol 3-phosphatidyltransferase	CDIPT	PIS, PIS1	-1.0kb	Anti-sense	Chr. 16 - 29858356 - 29863288 on NCBI Build GRCh38
Downstream	seizure related 6 homolog like 2	SEZ6L2	BSRPA, PSK-1	6.3kb	Anti-sense	Chr. 16 - 29871159 - 29899573 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC1600007430.hg.1
This assay targets the same location as HTA transcript cluster(s) TC16000331.hg.1

Set Membership:

Amplicon length less than or equal to 70

Mammalian Gene Collection

Detect Genomic DNA

Homo sapiens

Probe spans exons

MicroArray Probes:

Affymetrix

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	TC1600007430.hg.1	ENST00000398859.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600007430.hg.1	ENST00000398859.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600007430.hg.1	ENST00000398859.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600007430.hg.1	ENST00000398859.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600007430.hg.1	ENST00000398859.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600007430.hg.1	ENST00000398859.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600007430.hg.1	ENST00000398859.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600007430.hg.1	ENST00000398859.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600007430.hg.1	ENST00000565014.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600007430.hg.1	ENST00000565014.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600007430.hg.1	ENST00000565014.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600007430.hg.1	ENST00000565014.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600007430.hg.1	ENST00000565014.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600007430.hg.1	ENST00000565014.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600007430.hg.1	ENST00000565014.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600007430.hg.1	ENST00000565014.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600007430.hg.1	ENST00000565014.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600007430.hg.1	ENST00000565014.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600007430.hg.1	ENST00000565014.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600007430.hg.1	ENST00000565014.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600007430.hg.1	ENST00000565014.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600007430.hg.1	ENST00000565014.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600007430.hg.1	ENST00000565014.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600007430.hg.1	ENST00000565014.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600007430.hg.1	ENST00000565014.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600007430.hg.1	ENST00000565014.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600007430.hg.1	NR_015396.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1600007430.hg.1	NR_015396.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1600007430.hg.1	NR_015396.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1600007430.hg.1	NR_015396.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1600007430.hg.1	NR_015396.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1600007430.hg.1	NR_015396.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1600007430.hg.1	NR_015396.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1600007430.hg.1	NR_015396.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1600007430.hg.1	NR_024370.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1600007430.hg.1	NR_024370.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1600007430.hg.1	NR_024370.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1600007430.hg.1	NR_024370.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1600007430.hg.1	NR_024370.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1600007430.hg.1	NR_024370.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1600007430.hg.1	NR_024370.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1600007430.hg.1	NR_024370.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR16004746.hg.1	ENST00000398859.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR16004746.hg.1	NR_015396.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR16004746.hg.1	NR_024370.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR16004746.hg.1	TC16000331.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR16004744.hg.1	ENST00000398859.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR16004744.hg.1	NR_015396.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR16004744.hg.1	TC16000331.hg.1	HTA TC
Affymetrix Human Clariom D Assay	PSR1600153857.hg.1	ENST00000398859.3	Ensembl
Affymetrix Human Clariom D Assay	PSR1600153857.hg.1	ENST00000565014.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1600153857.hg.1	ENST00000565014.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1600153857.hg.1	NR_015396.1	Refseq
Affymetrix Human Clariom D Assay	PSR1600153857.hg.1	NR_024370.1	Refseq
Affymetrix Human Clariom D Assay	PSR1600153857.hg.1	TC1600007430.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1600153857.hg.1	NR_015396.1	Refseq
Affymetrix Human Clariom D Assay	PSR1600153857.hg.1	ENST00000398859.3	Ensembl
Affymetrix Human Clariom D Assay	PSR1600153857.hg.1	ENST00000565014.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1600153857.hg.1	ENST00000565014.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1600153857.hg.1	NR_024370.1	Refseq
Affymetrix Human Clariom D Assay	TC1600007430.hg.1	ENST00000398859.3	Ensembl
Affymetrix Human Clariom D Assay	TC1600007430.hg.1	ENST00000398859.3	Ensembl
Affymetrix Human Clariom D Assay	TC1600007430.hg.1	ENST00000398859.3	Ensembl
Affymetrix Human Clariom D Assay	TC1600007430.hg.1	ENST00000398859.3	Ensembl
Affymetrix Human Clariom D Assay	TC1600007430.hg.1	ENST00000398859.3	Ensembl
Affymetrix Human Clariom D Assay	TC1600007430.hg.1	ENST00000398859.3	Ensembl
Affymetrix Human Clariom D Assay	TC1600007430.hg.1	ENST00000398859.3	Ensembl
Affymetrix Human Clariom D Assay	TC1600007430.hg.1	ENST00000398859.3	Ensembl
Affymetrix Human Clariom D Assay	TC1600007430.hg.1	ENST00000565014.1	Ensembl
Affymetrix Human Clariom D Assay	TC1600007430.hg.1	ENST00000565014.1	Ensembl
Affymetrix Human Clariom D Assay	TC1600007430.hg.1	ENST00000565014.1	Ensembl
Affymetrix Human Clariom D Assay	TC1600007430.hg.1	ENST00000565014.1	Ensembl
Affymetrix Human Clariom D Assay	TC1600007430.hg.1	ENST00000565014.1	Ensembl
Affymetrix Human Clariom D Assay	TC1600007430.hg.1	ENST00000565014.1	Ensembl
Affymetrix Human Clariom D Assay	TC1600007430.hg.1	ENST00000565014.1	Ensembl
Affymetrix Human Clariom D Assay	TC1600007430.hg.1	ENST00000565014.1	Ensembl
Affymetrix Human Clariom D Assay	TC1600007430.hg.1	ENST00000565014.1	Ensembl
Affymetrix Human Clariom D Assay	TC1600007430.hg.1	ENST00000565014.1	Ensembl
Affymetrix Human Clariom D Assay	TC1600007430.hg.1	ENST00000565014.1	Ensembl
Affymetrix Human Clariom D Assay	TC1600007430.hg.1	ENST00000565014.1	Ensembl
Affymetrix Human Clariom D Assay	TC1600007430.hg.1	ENST00000565014.1	Ensembl
Affymetrix Human Clariom D Assay	TC1600007430.hg.1	ENST00000565014.1	Ensembl
Affymetrix Human Clariom D Assay	TC1600007430.hg.1	ENST00000565014.1	Ensembl
Affymetrix Human Clariom D Assay	TC1600007430.hg.1	ENST00000565014.1	Ensembl
Affymetrix Human Clariom D Assay	TC1600007430.hg.1	ENST00000565014.1	Ensembl
Affymetrix Human Clariom D Assay	TC1600007430.hg.1	ENST00000565014.1	Ensembl
Affymetrix Human Clariom D Assay	TC1600007430.hg.1	NR_015396.1	Refseq
Affymetrix Human Clariom D Assay	TC1600007430.hg.1	NR_015396.1	Refseq
Affymetrix Human Clariom D Assay	TC1600007430.hg.1	NR_015396.1	Refseq
Affymetrix Human Clariom D Assay	TC1600007430.hg.1	NR_015396.1	Refseq
Affymetrix Human Clariom D Assay	TC1600007430.hg.1	NR_015396.1	Refseq
Affymetrix Human Clariom D Assay	TC1600007430.hg.1	NR_015396.1	Refseq
Affymetrix Human Clariom D Assay	TC1600007430.hg.1	NR_015396.1	Refseq
Affymetrix Human Clariom D Assay	TC1600007430.hg.1	NR_015396.1	Refseq
Affymetrix Human Clariom D Assay	TC1600007430.hg.1	NR_024370.1	Refseq
Affymetrix Human Clariom D Assay	TC1600007430.hg.1	NR_024370.1	Refseq
Affymetrix Human Clariom D Assay	TC1600007430.hg.1	NR_024370.1	Refseq
Affymetrix Human Clariom D Assay	TC1600007430.hg.1	NR_024370.1	Refseq
Affymetrix Human Clariom D Assay	TC1600007430.hg.1	NR_024370.1	Refseq
Affymetrix Human Clariom D Assay	TC1600007430.hg.1	NR_024370.1	Refseq
Affymetrix Human Clariom D Assay	TC1600007430.hg.1	NR_024370.1	Refseq
Affymetrix Human Clariom D Assay	TC1600007430.hg.1	NR_024370.1	Refseq
Affymetrix Human Clariom D Assay	PSR1600153854.hg.1	ENST00000398859.3	Ensembl
Affymetrix Human Clariom D Assay	PSR1600153854.hg.1	NR_015396.1	Refseq
Affymetrix Human Clariom D Assay	PSR1600153854.hg.1	TC1600007430.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1600153854.hg.1	ENST00000398859.3	Ensembl
Affymetrix Human Clariom D Assay	PSR1600153854.hg.1	NR_015396.1	Refseq

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System Message

Genomic Map