Hs01000694_m1

• Gene Symbol: TRERF1
• Gene Name: transcriptional regulating factor 1
• Gene Aliases: BCAR2, HSA277276, RAPA, TREP132, TReP-132, dJ139D8.5
• Chromosome Location: Chr.6: 42224933 - 42452216 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: TRERF1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_033502.3	NP_277037.1	8 - 9	2452		85
	XM_017011045.1	XP_016866534.1	8 - 9	2962		85
	XM_017011049.1	XP_016866538.1	8 - 9	2870		85
GenBank mRNA	AF297872.1	-	8 - 9	2446		85
	AM404183.1	-	8 - 9	2452		85
	AM404259.1	-	8 - 9	2452		85

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0600011823.hg.1
This assay targets the same location as HTA transcript cluster(s) TC06001732.hg.1

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, Homo sapiens, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene TRERF1

Gene Ontology Categories:

Process(es)

transcription, DNA-templated
regulation of transcription from RNA polymerase II promoter
steroid biosynthetic process
cholesterol catabolic process
multicellular organism development
homeostatic process
positive regulation of transcription, DNA-templated
regulation of hormone biosynthetic process

Function(s)

RNA polymerase II transcription cofactor activity
transcription factor activity, sequence-specific DNA binding
transcription factor binding
DNA binding, bending
ligand-dependent nuclear receptor transcription coactivator activity
transcription regulatory region DNA binding
metal ion binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR06020705.hg.1	TC06001732.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR06020705.hg.1	ENST00000340840.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR06020705.hg.1	ENST00000354325.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR06020705.hg.1	ENST00000372917.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR06020705.hg.1	ENST00000372922.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR06020705.hg.1	ENST00000541110.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR06020705.hg.1	NM_033502.3	Refseq
Affymetrix Human Clariom D Assay	PSR0600181231.hg.1	ENST00000340840.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0600181231.hg.1	ENST00000354325.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0600181231.hg.1	ENST00000372917.8	Ensembl
Affymetrix Human Clariom D Assay	PSR0600181231.hg.1	ENST00000372922.8	Ensembl
Affymetrix Human Clariom D Assay	PSR0600181231.hg.1	ENST00000541110.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0600181231.hg.1	NM_001297573.1	Refseq
Affymetrix Human Clariom D Assay	PSR0600181231.hg.1	NM_033502.3	Refseq
Affymetrix Human Clariom D Assay	PSR0600181231.hg.1	ENST00000340840.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0600181231.hg.1	ENST00000354325.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0600181231.hg.1	ENST00000372917.8	Ensembl
Affymetrix Human Clariom D Assay	PSR0600181231.hg.1	ENST00000372922.8	Ensembl
Affymetrix Human Clariom D Assay	PSR0600181231.hg.1	ENST00000541110.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0600181231.hg.1	NM_001297573.1	Refseq
Affymetrix Human Clariom D Assay	PSR0600181231.hg.1	NM_033502.3	Refseq
Affymetrix Human Clariom D Assay	PSR0600181231.hg.1	TC0600011823.hg.1	Clariom D TC