Hs01001415_m1

• Gene Symbol: CDK5RAP2
• Gene Name: CDK5 regulatory subunit associated protein 2
• Gene Aliases: C48, Cep215, MCPH3
• Chromosome Location: Chr.9: 120388869 - 120580170 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: CDK5RAP2
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001011649.2	NP_001011649.1	19 - 20	2385		134
	NM_018249.5	NP_060719.4	19 - 20	2385		134
	NR_073554.1		19 - 20	2462		134
	NR_073555.1		19 - 20	2385		134
	NR_073556.1		20 - 21	2592		134
	NR_073557.1		19 - 20	2465		134
	NR_073558.1		19 - 20	2462		134
	XM_011518860.1	XP_011517162.1	19 - 20	2371		134
	XM_017014922.1	XP_016870411.1	13 - 14	1603		134
	XM_017014924.1	XP_016870413.1	10 - 11	1359		134
GenBank mRNA	AB046853.2	-	19 - 20	2354		134
	AF448860.1	-	19 - 20	2335		134
	AK122913.1	-	19 - 20	2374		134
	AL833481.1	-	19 - 20	2373		134
	BC143762.1	-	19 - 20	2220	9052276	134
	BC146782.1	-	19 - 20	2354	9007237	134
	BX537421.1	-	19 - 20	2370		134
	CR936622.1	-	12 - 13	1515		134
	CR936717.1	-	12 - 13	1515		134
	KP294527.1	-	19 - 20	2385		134

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0900011378.hg
This assay targets the same location as HTA transcript cluster(s) TC09001536.hg

Additional Information:

This assay is in the 5'UTR region of the XM_017014924.1 transcripts.

• Set Membership: Ambion siRNA available, Amplicon length greater than or equal to 101, Mammalian Gene Collection, Homo sapiens, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene CDK5RAP2

Gene Ontology Categories:

Process(es)

G2/M transition of mitotic cell cycle
establishment of mitotic spindle orientation
microtubule cytoskeleton organization
microtubule bundle formation
chromosome segregation
centriole replication
brain development
neurogenesis
microtubule organizing center organization
regulation of neuron differentiation
negative regulation of neuron differentiation
positive regulation of transcription, DNA-templated
negative regulation of centriole replication
centrosome organization
regulation of spindle checkpoint

Function(s)

protein binding
calmodulin binding
microtubule binding
tubulin binding
protein kinase binding
protein complex binding
transcription regulatory region DNA binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR09019194.hg.1	TC09001536.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR09019194.hg.1	ENST00000349780.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR09019194.hg.1	ENST00000359309.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR09019194.hg.1	ENST00000360190.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR09019194.hg.1	ENST00000360822.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR09019194.hg.1	NM_001011649.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR09019194.hg.1	NM_018249.5	Refseq
Affymetrix Human Clariom D Assay	PSR0900177479.hg.1	ENST00000349780.8	Ensembl
Affymetrix Human Clariom D Assay	PSR0900177479.hg.1	ENST00000360190.8	Ensembl
Affymetrix Human Clariom D Assay	PSR0900177479.hg.1	ENST00000416449.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0900177479.hg.1	ENST00000473282.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0900177479.hg.1	ENST00000480112.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0900177479.hg.1	ENST00000483412.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0900177479.hg.1	NM_001011649.2	Refseq
Affymetrix Human Clariom D Assay	PSR0900177479.hg.1	NM_018249.5	Refseq
Affymetrix Human Clariom D Assay	PSR0900177479.hg.1	NR_073554.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900177479.hg.1	NR_073555.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900177479.hg.1	NR_073556.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900177479.hg.1	NR_073557.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900177479.hg.1	NR_073558.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900177479.hg.1	ENST00000349780.8	Ensembl
Affymetrix Human Clariom D Assay	PSR0900177479.hg.1	ENST00000360190.8	Ensembl
Affymetrix Human Clariom D Assay	PSR0900177479.hg.1	ENST00000416449.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0900177479.hg.1	ENST00000473282.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0900177479.hg.1	ENST00000480112.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0900177479.hg.1	ENST00000483412.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0900177479.hg.1	NM_001011649.2	Refseq
Affymetrix Human Clariom D Assay	PSR0900177479.hg.1	NM_018249.5	Refseq
Affymetrix Human Clariom D Assay	PSR0900177479.hg.1	NR_073554.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900177479.hg.1	NR_073555.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900177479.hg.1	NR_073556.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900177479.hg.1	NR_073557.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900177479.hg.1	NR_073558.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900177479.hg.1	TC0900011378.hg.1	Clariom D TC