Hs01004693_g1

• Gene Symbol: MATR3
• Gene Name: matrin 3
• Gene Aliases: ALS21, MPD2, VCPDM
• Chromosome Location: Chr.5: 139273752 - 139331677 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: MATR3
Interrogated Sequence		Translated Protein	RNADB ID	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001194954.1	NP_001181883.1		6 - 7	1707		67
	NM_001194955.1	NP_001181884.1		4 - 5	1467		67
	NM_001194956.1	NP_001181885.1		3 - 4	378		67
	NM_001282278.1	NP_001269207.1		6 - 7	700		67
	NM_018834.5	NP_061322.2		4 - 5	1350		67
	NM_199189.2	NP_954659.1		7 - 8	1789		67
GenBank mRNA	AB018266.1	-		4 - 5	1221		67
	AF117236.1	-		3 - 4	1267		67
	AJ224169.1	-	LIT1321 U19HG	6 - 7	321		67
	AK001388.1	-		3 - 4	170		67
	AK293952.1	-		6 - 7	350		67
	AK299399.1	-		3 - 4	354		67
	AK307872.1	-		6 - 7	1707		67
	AK316420.1	-		3 - 4	378		67
	BC015031.2	-		3 - 4	1190	3921668	67
	BX537365.1	-		4 - 5	1253		67
	BX647153.1	-		2 - 3	4714		67
	CR749625.1	-		7 - 8	1440		67
	DC401586.1	-		3 - 4	318		67

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0500008810.hg
This assay targets the same location as HTA transcript cluster(s) TC05000707.hg

Additional Information:

This assay is in the 5'UTR region of the AK001388.1,AK293952.1,NM_001282278.1 transcripts.

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, Mammalian Gene Collection, Detect Genomic DNA, Homo sapiens, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene MATR3

Gene Ontology Categories:

Process(es)

posttranscriptional regulation of gene expression

Function(s)

nucleotide binding
structural molecule activity
protein binding
zinc ion binding
poly(A) RNA binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR05010057.hg.1	TC05000707.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR05010057.hg.1	ENST00000361059.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR05010057.hg.1	ENST00000394800.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR05010057.hg.1	ENST00000394805.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR05010057.hg.1	ENST00000502499.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR05010057.hg.1	ENST00000502929.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR05010057.hg.1	ENST00000503811.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR05010057.hg.1	ENST00000504203.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR05010057.hg.1	ENST00000509990.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR05010057.hg.1	ENST00000510056.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR05010057.hg.1	NM_001194954.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR05010057.hg.1	NM_001194955.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR05010057.hg.1	NM_001194956.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR05010057.hg.1	NM_018834.5	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR05010057.hg.1	NM_199189.2	Refseq
Affymetrix Human Clariom D Assay	PSR0500160817.hg.1	ENST00000361059.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0500160817.hg.1	ENST00000394800.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0500160817.hg.1	ENST00000394805.7	Ensembl
Affymetrix Human Clariom D Assay	PSR0500160817.hg.1	ENST00000502422.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0500160817.hg.1	ENST00000502499.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0500160817.hg.1	ENST00000502929.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0500160817.hg.1	ENST00000503811.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0500160817.hg.1	ENST00000504045.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0500160817.hg.1	ENST00000504203.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0500160817.hg.1	ENST00000504311.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0500160817.hg.1	ENST00000504643.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0500160817.hg.1	ENST00000505625.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0500160817.hg.1	ENST00000506147.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0500160817.hg.1	ENST00000509644.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0500160817.hg.1	ENST00000509918.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0500160817.hg.1	ENST00000509990.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0500160817.hg.1	ENST00000510056.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0500160817.hg.1	ENST00000511333.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0500160817.hg.1	ENST00000511978.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0500160817.hg.1	ENST00000512876.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0500160817.hg.1	ENST00000513678.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0500160817.hg.1	ENST00000514528.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0500160817.hg.1	ENST00000515833.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0500160817.hg.1	ENST00000618441.4	Ensembl
Affymetrix Human Clariom D Assay	PSR0500160817.hg.1	NM_001194954.1	Refseq
Affymetrix Human Clariom D Assay	PSR0500160817.hg.1	NM_001194955.1	Refseq
Affymetrix Human Clariom D Assay	PSR0500160817.hg.1	NM_001194956.1	Refseq
Affymetrix Human Clariom D Assay	PSR0500160817.hg.1	NM_001282278.1	Refseq
Affymetrix Human Clariom D Assay	PSR0500160817.hg.1	NM_018834.5	Refseq
Affymetrix Human Clariom D Assay	PSR0500160817.hg.1	NM_199189.2	Refseq
Affymetrix Human Clariom D Assay	PSR0500160817.hg.1	ENST00000361059.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0500160817.hg.1	ENST00000394800.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0500160817.hg.1	ENST00000394805.7	Ensembl
Affymetrix Human Clariom D Assay	PSR0500160817.hg.1	ENST00000502422.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0500160817.hg.1	ENST00000502499.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0500160817.hg.1	ENST00000502929.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0500160817.hg.1	ENST00000503811.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0500160817.hg.1	ENST00000504045.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0500160817.hg.1	ENST00000504203.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0500160817.hg.1	ENST00000504311.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0500160817.hg.1	ENST00000504643.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0500160817.hg.1	ENST00000505625.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0500160817.hg.1	ENST00000506147.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0500160817.hg.1	ENST00000509644.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0500160817.hg.1	ENST00000509918.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0500160817.hg.1	ENST00000509990.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0500160817.hg.1	ENST00000510056.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0500160817.hg.1	ENST00000511333.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0500160817.hg.1	ENST00000511978.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0500160817.hg.1	ENST00000512876.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0500160817.hg.1	ENST00000513678.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0500160817.hg.1	ENST00000514528.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0500160817.hg.1	ENST00000515833.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0500160817.hg.1	ENST00000618441.4	Ensembl
Affymetrix Human Clariom D Assay	PSR0500160817.hg.1	NM_001194954.1	Refseq
Affymetrix Human Clariom D Assay	PSR0500160817.hg.1	NM_001194955.1	Refseq
Affymetrix Human Clariom D Assay	PSR0500160817.hg.1	NM_001194956.1	Refseq
Affymetrix Human Clariom D Assay	PSR0500160817.hg.1	NM_001282278.1	Refseq
Affymetrix Human Clariom D Assay	PSR0500160817.hg.1	NM_018834.5	Refseq
Affymetrix Human Clariom D Assay	PSR0500160817.hg.1	NM_199189.2	Refseq
Affymetrix Human Clariom D Assay	PSR0500160817.hg.1	TC0500008810.hg.1	Clariom D TC