Hs01006005_m1

• Gene Symbol: PTBP3
• Gene Name: polypyrimidine tract binding protein 3
• Gene Aliases: ROD1
• Chromosome Location: Chr.9: 112217715 - 112333664 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: PTBP3
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001163788.2	NP_001157260.1	10 - 11	1303		104
	NM_001163790.2	NP_001157262.1	11 - 12	1337		104
	NM_001244896.1	NP_001231825.1	9 - 10	1133		104
	NM_001244897.1	NP_001231826.1	10 - 11	1303		104
	NM_001244898.1	NP_001231827.1	10 - 11	1342		104
	NM_005156.6	NP_005147.3	11 - 12	1328		104
	XM_006717346.1	XP_006717409.1	10 - 11	1249		104
	XM_011519265.1	XP_011517567.1	10 - 11	1263		104
	XM_017015365.1	XP_016870854.1	9 - 10	1114		104
GenBank mRNA	AB023967.1	-	9 - 10	1094		104
	AK001685.1	-	9 - 10	1053		104
	AK302558.1	-	10 - 11	1220		104
	BC039896.1	-	10 - 11	1270		104
	BC044585.1	-	10 - 11	1343	5295452	104
	CR749471.1	-	11 - 12	1260		104

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0900011217.hg.1
This assay targets the same location as HTA transcript cluster(s) TC09001488.hg.1

• Set Membership: Ambion siRNA available, Amplicon length greater than or equal to 101, Mammalian Gene Collection, Homo sapiens, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene PTBP3

Gene Ontology Categories:

Process(es)

mRNA processing
RNA splicing
anatomical structure morphogenesis
negative regulation of RNA splicing
erythrocyte maturation
regulation of cell differentiation

Function(s)

nucleotide binding
RNA binding
poly(A) RNA binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR09018483.hg.1	TC09001488.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR09018483.hg.1	ENST00000334318.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR09018483.hg.1	ENST00000343327.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR09018483.hg.1	ENST00000374255.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR09018483.hg.1	ENST00000374257.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR09018483.hg.1	ENST00000458258.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR09018483.hg.1	NM_001163788.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR09018483.hg.1	NM_001163790.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR09018483.hg.1	NM_001244896.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR09018483.hg.1	NM_001244897.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR09018483.hg.1	NM_001244898.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR09018483.hg.1	NM_005156.6	Refseq
Affymetrix Human Clariom D Assay	PSR0900176376.hg.1	ENST00000334318.10	Ensembl
Affymetrix Human Clariom D Assay	PSR0900176376.hg.1	ENST00000343327.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0900176376.hg.1	ENST00000374255.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0900176376.hg.1	ENST00000374257.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0900176376.hg.1	ENST00000458258.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0900176376.hg.1	NM_001163788.2	Refseq
Affymetrix Human Clariom D Assay	PSR0900176376.hg.1	NM_001163790.2	Refseq
Affymetrix Human Clariom D Assay	PSR0900176376.hg.1	NM_001244896.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900176376.hg.1	NM_001244897.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900176376.hg.1	NM_001244898.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900176376.hg.1	NM_005156.6	Refseq
Affymetrix Human Clariom D Assay	PSR0900176376.hg.1	ENST00000334318.10	Ensembl
Affymetrix Human Clariom D Assay	PSR0900176376.hg.1	ENST00000343327.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0900176376.hg.1	ENST00000374255.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0900176376.hg.1	ENST00000374257.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0900176376.hg.1	ENST00000458258.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0900176376.hg.1	NM_001163788.2	Refseq
Affymetrix Human Clariom D Assay	PSR0900176376.hg.1	NM_001163790.2	Refseq
Affymetrix Human Clariom D Assay	PSR0900176376.hg.1	NM_001244896.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900176376.hg.1	NM_001244897.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900176376.hg.1	NM_001244898.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900176376.hg.1	NM_005156.6	Refseq
Affymetrix Human Clariom D Assay	PSR0900176376.hg.1	TC0900011217.hg.1	Clariom D TC