Hs01006388_g1

• Gene Symbol: SYNGAP1
• Gene Name: synaptic Ras GTPase activating protein 1
• Gene Aliases: MRD5, RASA1, RASA5, SYNGAP
• Chromosome Location: Chr.6: 33420070 - 33453689 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: SYNGAP1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_006772.2	NP_006763.2	14 - 15	2525		64
GenBank mRNA	AL713634.1	-	7 - 8	1181		64

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0600014111.hg.1
This assay targets the same location as HTA transcript cluster(s) TC06000424.hg.1, TC6_ssto_hap7000093.hg.1

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, Detect Genomic DNA, Homo sapiens, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene SYNGAP1

Panther Classification:

Molecular Function -

GTPase-activating protein

Gene Ontology Categories:

Process(es)

MAPK cascade
Ras protein signal transduction
pattern specification process
visual learning
dendrite development
receptor clustering
regulation of MAPK cascade
negative regulation of neuron apoptotic process
positive regulation of GTPase activity
negative regulation of Ras protein signal transduction
regulation of synaptic plasticity
regulation of long-term neuronal synaptic plasticity
negative regulation of axonogenesis

Function(s)

GTPase activator activity
SH3 domain binding
protein kinase binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR06005054.hg.1	TC06000424.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR06005054.hg.1	ENST00000293748.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR06005054.hg.1	ENST00000418600.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR06005054.hg.1	ENST00000428982.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR06005054.hg.1	ENST00000449372.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR06005054.hg.1	ENST00000496374.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR06005054.hg.1	NM_006772.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_ssto_hap7001839.hg.1	TC6_ssto_hap7000093.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR6_ssto_hap7001839.hg.1	NM_006772.2	Refseq
Affymetrix Human Clariom D Assay	PSR0600198464.hg.1	ENST00000293748.9	Ensembl
Affymetrix Human Clariom D Assay	PSR0600198464.hg.1	ENST00000418600.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0600198464.hg.1	ENST00000428982.4	Ensembl
Affymetrix Human Clariom D Assay	PSR0600198464.hg.1	ENST00000449372.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0600198464.hg.1	ENST00000628646.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0600198464.hg.1	NM_006772.2	Refseq
Affymetrix Human Clariom D Assay	PSR0600198464.hg.1	ENST00000293748.9	Ensembl
Affymetrix Human Clariom D Assay	PSR0600198464.hg.1	ENST00000418600.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0600198464.hg.1	ENST00000428982.4	Ensembl
Affymetrix Human Clariom D Assay	PSR0600198464.hg.1	ENST00000449372.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0600198464.hg.1	ENST00000628646.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0600198464.hg.1	NM_006772.2	Refseq
Affymetrix Human Clariom D Assay	PSR0600198464.hg.1	TC0600014111.hg.1	Clariom D TC