Hs01007796_m1

• Gene Symbol: ATP2B1
• Gene Name: ATPase plasma membrane Ca2+ transporting 1
• Gene Aliases: PMCA1, PMCA1kb
• Chromosome Location: Chr.12: 89588049 - 89709353 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: ATP2B1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001001323.1	NP_001001323.1	20 - 21	3691		144
	XM_017019359.1	XP_016874848.1	19 - 20	3535		144
GenBank mRNA	AB208896.1	-	16 - 17	2608		144
	AK308723.1	-	4 - 5	576		144
	S49852.1	-	2 - 3	314		144

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC1200011474.hg.1
This assay targets the same location as HTA transcript cluster(s) TC12001798.hg.1

• Set Membership: Ambion siRNA available, Amplicon length greater than or equal to 101, Ion Channel, Transporter, 3' Most, Homo sapiens, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene ATP2B1

Panther Classification:

Molecular Function -

primary active transporter

Gene Ontology Categories:

Process(es)

neural retina development
transport
cellular calcium ion homeostasis
brain development
aging
response to cold
ion transmembrane transport
calcium ion transmembrane transport
cellular response to vitamin D
cellular response to corticosterone stimulus
calcium ion export
regulation of cardiac conduction

Function(s)

calcium-transporting ATPase activity
protein binding
calmodulin binding
ATP binding
PDZ domain binding
metal ion binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR12023780.hg.1	ENST00000261173.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR12023780.hg.1	ENST00000348959.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR12023780.hg.1	ENST00000359142.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR12023780.hg.1	ENST00000393164.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR12023780.hg.1	ENST00000428670.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR12023780.hg.1	NM_001001323.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR12023780.hg.1	NM_001682.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR12023780.hg.1	TC12001798.hg.1	HTA TC
Affymetrix Human Clariom D Assay	PSR1200188928.hg.1	ENST00000261173.6	Ensembl
Affymetrix Human Clariom D Assay	PSR1200188928.hg.1	ENST00000359142.7	Ensembl
Affymetrix Human Clariom D Assay	PSR1200188928.hg.1	ENST00000393164.6	Ensembl
Affymetrix Human Clariom D Assay	PSR1200188928.hg.1	ENST00000428670.7	Ensembl
Affymetrix Human Clariom D Assay	PSR1200188928.hg.1	ENST00000550716.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1200188928.hg.1	NM_001001323.1	Refseq
Affymetrix Human Clariom D Assay	PSR1200188928.hg.1	NM_001682.2	Refseq
Affymetrix Human Clariom D Assay	PSR1200188928.hg.1	ENST00000261173.6	Ensembl
Affymetrix Human Clariom D Assay	PSR1200188928.hg.1	ENST00000359142.7	Ensembl
Affymetrix Human Clariom D Assay	PSR1200188928.hg.1	ENST00000393164.6	Ensembl
Affymetrix Human Clariom D Assay	PSR1200188928.hg.1	ENST00000428670.7	Ensembl
Affymetrix Human Clariom D Assay	PSR1200188928.hg.1	ENST00000550716.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1200188928.hg.1	NM_001001323.1	Refseq
Affymetrix Human Clariom D Assay	PSR1200188928.hg.1	NM_001682.2	Refseq
Affymetrix Human Clariom D Assay	PSR1200188928.hg.1	TC1200011474.hg.1	Clariom D TC