Hs01007944_m1

• Gene Symbol: VCAN
• Gene Name: versican
• Gene Aliases: CSPG2, ERVR, GHAP, PG-M, WGN, WGN1
• Chromosome Location: Chr.5: 83471674 - 83582303 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: VCAN
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_004385.4	NP_004376.2	7 - 8	4354		153
GenBank mRNA	AB209491.1	-	7 - 8	4237		153
	U16306.1	-	7 - 8	4264		153

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0500007972.hg.1
This assay targets the same location as HTA transcript cluster(s) TC05000412.hg.1

• Set Membership: Ambion siRNA available, Amplicon length greater than or equal to 101, Homo sapiens, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene VCAN

Gene Ontology Categories:

Process(es)

skeletal system development
osteoblast differentiation
cell adhesion
multicellular organism development
central nervous system development
cell recognition
extracellular matrix organization
glycosaminoglycan metabolic process
chondroitin sulfate biosynthetic process
chondroitin sulfate catabolic process
dermatan sulfate biosynthetic process

Function(s)

extracellular matrix structural constituent
calcium ion binding
protein binding
glycosaminoglycan binding
hyaluronic acid binding
carbohydrate binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR05005946.hg.1	ENST00000265077.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR05005946.hg.1	ENST00000343200.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR05005946.hg.1	ENST00000513016.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR05005946.hg.1	NM_001164097.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR05005946.hg.1	NM_004385.4	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR05005946.hg.1	TC05000412.hg.1	HTA TC
Affymetrix Human Clariom D Assay	PSR0500154612.hg.1	ENST00000265077.7	Ensembl
Affymetrix Human Clariom D Assay	PSR0500154612.hg.1	ENST00000343200.9	Ensembl
Affymetrix Human Clariom D Assay	PSR0500154612.hg.1	ENST00000513016.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0500154612.hg.1	ENST00000513960.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0500154612.hg.1	ENST00000515397.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0500154612.hg.1	NM_001164097.1	Refseq
Affymetrix Human Clariom D Assay	PSR0500154612.hg.1	NM_004385.4	Refseq
Affymetrix Human Clariom D Assay	PSR0500154612.hg.1	TC0500007972.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0500154612.hg.1	ENST00000343200.9	Ensembl
Affymetrix Human Clariom D Assay	PSR0500154612.hg.1	ENST00000265077.7	Ensembl
Affymetrix Human Clariom D Assay	PSR0500154612.hg.1	ENST00000513016.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0500154612.hg.1	ENST00000513960.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0500154612.hg.1	ENST00000515397.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0500154612.hg.1	NM_001164097.1	Refseq
Affymetrix Human Clariom D Assay	PSR0500154612.hg.1	NM_004385.4	Refseq