Hs01010141_m1

• Gene Symbol: SDK1
• Gene Name: sidekick cell adhesion molecule 1
• Gene Aliases: -
• Chromosome Location: Chr.7: 3301448 - 4269000 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: SDK1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001079653.1	NP_001073121.1	2 - 3	509		72
	NM_152744.3	NP_689957.3	28 - 29	4364		72
	XM_011515188.1	XP_011513490.1	22 - 23	3202		72
	XM_011515189.1	XP_011513491.1	22 - 23	3202		72
	XM_011515190.1	XP_011513492.1	22 - 23	3202		72
	XM_017011837.1	XP_016867326.1	22 - 23	3202		72
	XM_017011838.1	XP_016867327.1	22 - 23	3202		72
	XM_017011839.1	XP_016867328.1	22 - 23	3202		72
	XM_017011840.1	XP_016867329.1	22 - 23	3202		72
GenBank mRNA	AK074083.1	-	14 - 15	2060		72
	AL833354.1	-	2 - 3	506		72
	AY310398.1	-	28 - 29	4364		72
	DB065853.1	-	2 - 3	505		72

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0700006583.hg.1
This assay targets the same location as HTA transcript cluster(s) TC07000040.hg.1

Additional Information:

This assay is in the 5'UTR region of the NM_001079653.1 transcripts.

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, Homo sapiens, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene SDK1

Gene Ontology Categories:

Process(es)

homophilic cell adhesion via plasma membrane adhesion molecules
synapse assembly
retina layer formation
behavioral response to cocaine
regulation of dendritic spine development

Function(s)

identical protein binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR07000621.hg.1	TC07000040.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR07000621.hg.1	ENST00000389531.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR07000621.hg.1	ENST00000404826.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR07000621.hg.1	ENST00000446104.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR07000621.hg.1	NM_001079653.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR07000621.hg.1	NM_152744.3	Refseq
Affymetrix Human Clariom D Assay	PSR0700145247.hg.1	ENST00000389531.7	Ensembl
Affymetrix Human Clariom D Assay	PSR0700145247.hg.1	ENST00000404826.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0700145247.hg.1	ENST00000476701.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0700145247.hg.1	ENST00000615806.4	Ensembl
Affymetrix Human Clariom D Assay	PSR0700145247.hg.1	NM_001079653.1	Refseq
Affymetrix Human Clariom D Assay	PSR0700145247.hg.1	NM_152744.3	Refseq
Affymetrix Human Clariom D Assay	PSR0700145247.hg.1	ENST00000389531.7	Ensembl
Affymetrix Human Clariom D Assay	PSR0700145247.hg.1	ENST00000404826.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0700145247.hg.1	ENST00000476701.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0700145247.hg.1	ENST00000615806.4	Ensembl
Affymetrix Human Clariom D Assay	PSR0700145247.hg.1	NM_001079653.1	Refseq
Affymetrix Human Clariom D Assay	PSR0700145247.hg.1	NM_152744.3	Refseq
Affymetrix Human Clariom D Assay	PSR0700145247.hg.1	TC0700006583.hg.1	Clariom D TC