Hs01011510_m1

• Gene Symbol: CAPN9
• Gene Name: calpain 9
• Gene Aliases: GC36, nCL-4
• Chromosome Location: Chr.1: 230747289 - 230803356 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: CAPN9
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001319676.1	NP_001306605.1	6 - 7			87
	NM_006615.2	NP_006606.1	8 - 9			87
	XM_011544017.1	XP_011542319.1	8 - 9			87
	XM_011544019.2	XP_011542321.1	6 - 7			87
	XM_011544020.1	XP_011542322.1	8 - 9			87
	XM_017000098.1	XP_016855587.1	7 - 8			87
	XM_017000099.1	XP_016855588.1	8 - 9			87
GenBank mRNA	AF022799.1	-	8 - 9			87
	AK298024.1	-	6 - 7	816		87
	AK313629.1	-	8 - 9			87
	BC027993.1	-	6 - 7	828	5173512	87

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0100011945.hg.1
This assay targets the same location as HTA transcript cluster(s) TC01001910.hg.1

• Set Membership: Ambion siRNA available, Amplicon length between 86 and 100, Mammalian Gene Collection, Homo sapiens, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene CAPN9

Gene Ontology Categories:

Process(es)

proteolysis
digestion

Function(s)

calcium-dependent cysteine-type endopeptidase activity
calcium ion binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR01029698.hg.1	ENST00000271971.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR01029698.hg.1	ENST00000354537.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR01029698.hg.1	ENST00000366666.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR01029698.hg.1	NM_006615.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR01029698.hg.1	NM_016452.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR01029698.hg.1	TC01001910.hg.1	HTA TC
Affymetrix Human Clariom D Assay	PSR0100188118.hg.1	ENST00000271971.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0100188118.hg.1	ENST00000354537.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0100188118.hg.1	ENST00000366666.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0100188118.hg.1	NM_006615.2	Refseq
Affymetrix Human Clariom D Assay	PSR0100188118.hg.1	NM_016452.2	Refseq
Affymetrix Human Clariom D Assay	PSR0100188118.hg.1	TC0100011945.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0100188118.hg.1	ENST00000271971.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0100188118.hg.1	ENST00000354537.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0100188118.hg.1	NM_006615.2	Refseq
Affymetrix Human Clariom D Assay	PSR0100188118.hg.1	ENST00000366666.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0100188118.hg.1	NM_016452.2	Refseq