Hs01014788_m1

• Gene Symbol: SETD2
• Gene Name: SET domain containing 2
• Gene Aliases: HBP231, HIF-1, HIP-1, HSPC069, HYPB, KMT3A, LLS, SET2, p231HBP
• Chromosome Location: Chr.3: 47016408 - 47164109 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: SETD2
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_014159.6	NP_054878.5	11 - 12	5441		62
	XM_011533631.2	XP_011531933.1	12 - 13	6937		62
	XM_011533632.2	XP_011531934.1	11 - 12	5513		62
	XM_011533633.2	XP_011531935.1	11 - 12	6804		62
	XM_011533634.1	XP_011531936.1	11 - 12	5466		62
	XM_017006270.1	XP_016861759.1	9 - 10	6640		62
GenBank mRNA	AB051519.2	-	9 - 10	3441		62
	AF161554.1	-	9 - 10	1185		62
	AL831959.1	-	8 - 9	4416		62
	AY576987.1	-	9 - 10	3950		62
	AY576988.1	-	10 - 11	3953		62
	BC090954.1	-	9 - 10	3231		62
	BC117162.1	-	9 - 10	4064	40125713	62
	BC117164.1	-	9 - 10	4064	40125715	62
	BX649110.1	-	9 - 10	5208		62

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0300010968.hg.1
This assay targets the same location as HTA transcript cluster(s) TC03001364.hg.1

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, Mammalian Gene Collection, Homo sapiens, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene SETD2

Panther Classification:

Molecular Function -

chromatin/chromatin-binding, or -regulatory protein, histone modifying enzyme

Gene Ontology Categories:

Process(es)

angiogenesis
morphogenesis of a branching structure
neural tube closure
mismatch repair
regulation of transcription, DNA-templated
transcription elongation from RNA polymerase II promoter
regulation of mRNA export from nucleus
forebrain development
nucleosome organization
cell migration involved in vasculogenesis
mesoderm morphogenesis
embryonic cranial skeleton morphogenesis
stem cell development
pericardium development
embryonic placenta morphogenesis
coronary vasculature morphogenesis
histone H3-K36 trimethylation
histone H3-K36 dimethylation

Function(s)

protein binding
histone-lysine N-methyltransferase activity
histone methyltransferase activity (H3-K36 specific)

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR03023394.hg.1	TC03001364.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR03023394.hg.1	ENST00000409792.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR03023394.hg.1	ENST00000451092.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR03023394.hg.1	ENST00000543224.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR03023394.hg.1	NM_014159.6	Refseq
Affymetrix Human Clariom D Assay	PSR0300180081.hg.1	ENST00000330022.11	Ensembl
Affymetrix Human Clariom D Assay	PSR0300180081.hg.1	ENST00000409792.3	Ensembl
Affymetrix Human Clariom D Assay	PSR0300180081.hg.1	ENST00000431180.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0300180081.hg.1	ENST00000445387.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0300180081.hg.1	NM_014159.6	Refseq
Affymetrix Human Clariom D Assay	PSR0300180081.hg.1	ENST00000330022.11	Ensembl
Affymetrix Human Clariom D Assay	PSR0300180081.hg.1	ENST00000409792.3	Ensembl
Affymetrix Human Clariom D Assay	PSR0300180081.hg.1	ENST00000431180.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0300180081.hg.1	ENST00000445387.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0300180081.hg.1	NM_014159.6	Refseq
Affymetrix Human Clariom D Assay	PSR0300180081.hg.1	TC0300010968.hg.1	Clariom D TC