Hs01015940_m1

• Gene Symbol: BCO1
• Gene Name: beta-carotene oxygenase 1
• Gene Aliases: BCDO, BCDO1, BCMO, BCMO1, BCO
• Chromosome Location: Chr.16: 81238642 - 81291142 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: BCO1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_017429.2	NP_059125.2	1 - 2	277		104
	XM_011523109.1	XP_011521411.1	1 - 2	326		104
	XM_017023286.1	XP_016878775.1	1 - 2	326		104
	XM_017023287.1	XP_016878776.1	1 - 2	326		104
	XM_017023288.1	XP_016878777.1	1 - 2	326		104
GenBank mRNA	AF294900.1	-	1 - 2	277		104
	AK001592.1	-	1 - 2	277		104
	AK296011.1	-	1 - 2	279		104
	BC126210.1	-	1 - 2	179	8991926	104
	BC126212.1	-	1 - 2	179	8991928	104

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC1600008577.hg.1
This assay targets the same location as HTA transcript cluster(s) TC16000637.hg.1

Additional Information:

This assay is in the 5'UTR region of the AF294900.1, AK001592.1, AK296011.1, BC126210.1, BC126212.1, NM_017429.2, XM_011523109.1, XM_017023286.1, XM_017023287.1, XM_017023288.1 transcripts.

• Set Membership: Ambion siRNA available, Amplicon length greater than or equal to 101, Mammalian Gene Collection, Homo sapiens, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene BCO1

Gene Ontology Categories:

Process(es)

retinoid metabolic process
vitamin A biosynthetic process
retinol metabolic process
retinal metabolic process
beta-carotene metabolic process

Function(s)

beta-carotene 15,15'-dioxygenase activity
metal ion binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR16009007.hg.1	ENST00000258168.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR16009007.hg.1	ENST00000425577.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR16009007.hg.1	NM_017429.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR16009007.hg.1	TC16000637.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR16009008.hg.1	ENST00000258168.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR16009008.hg.1	ENST00000425577.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR16009008.hg.1	NM_017429.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR16009008.hg.1	TC16000637.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR16009009.hg.1	ENST00000258168.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR16009009.hg.1	ENST00000425577.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR16009009.hg.1	NM_017429.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR16009009.hg.1	TC16000637.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	TC1600008577.hg.1	ENST00000258168.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008577.hg.1	ENST00000258168.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008577.hg.1	ENST00000258168.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008577.hg.1	ENST00000258168.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008577.hg.1	ENST00000258168.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008577.hg.1	ENST00000258168.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008577.hg.1	ENST00000258168.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008577.hg.1	ENST00000258168.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008577.hg.1	ENST00000258168.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008577.hg.1	ENST00000258168.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008577.hg.1	ENST00000258168.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008577.hg.1	ENST00000258168.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008577.hg.1	ENST00000258168.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008577.hg.1	ENST00000258168.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008577.hg.1	ENST00000258168.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008577.hg.1	ENST00000258168.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008577.hg.1	ENST00000258168.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008577.hg.1	ENST00000563804.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008577.hg.1	ENST00000563804.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008577.hg.1	ENST00000563804.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008577.hg.1	ENST00000563804.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008577.hg.1	ENST00000563804.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008577.hg.1	ENST00000563804.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008577.hg.1	ENST00000563804.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008577.hg.1	ENST00000563804.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008577.hg.1	ENST00000563804.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008577.hg.1	ENST00000563804.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008577.hg.1	ENST00000563804.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008577.hg.1	ENST00000563804.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008577.hg.1	ENST00000563804.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008577.hg.1	ENST00000563804.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008577.hg.1	ENST00000564552.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008577.hg.1	ENST00000564552.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008577.hg.1	ENST00000564552.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008577.hg.1	ENST00000564552.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008577.hg.1	ENST00000564552.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008577.hg.1	ENST00000564552.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008577.hg.1	ENST00000564552.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008577.hg.1	NM_017429.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1600008577.hg.1	NM_017429.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1600008577.hg.1	NM_017429.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1600008577.hg.1	NM_017429.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1600008577.hg.1	NM_017429.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1600008577.hg.1	NM_017429.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1600008577.hg.1	NM_017429.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1600008577.hg.1	NM_017429.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1600008577.hg.1	NM_017429.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1600008577.hg.1	NM_017429.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1600008577.hg.1	NM_017429.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1600008577.hg.1	NM_017429.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1600008577.hg.1	NM_017429.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1600008577.hg.1	NM_017429.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1600008577.hg.1	NM_017429.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1600008577.hg.1	NM_017429.2	Refseq
Affymetrix Human Clariom D Assay	PSR1600163994.hg.1	ENST00000258168.6	Ensembl
Affymetrix Human Clariom D Assay	PSR1600163994.hg.1	ENST00000563804.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1600163994.hg.1	ENST00000564552.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1600163994.hg.1	NM_017429.2	Refseq
Affymetrix Human Clariom D Assay	PSR1600163994.hg.1	TC1600008577.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1600163994.hg.1	ENST00000258168.6	Ensembl
Affymetrix Human Clariom D Assay	PSR1600163994.hg.1	ENST00000563804.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1600163994.hg.1	ENST00000564552.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1600163994.hg.1	NM_017429.2	Refseq
Affymetrix Human Clariom D Assay	PSR1600163996.hg.1	ENST00000258168.6	Ensembl
Affymetrix Human Clariom D Assay	PSR1600163996.hg.1	ENST00000563804.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1600163996.hg.1	ENST00000564552.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1600163996.hg.1	NM_017429.2	Refseq
Affymetrix Human Clariom D Assay	PSR1600163996.hg.1	TC1600008577.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1600163996.hg.1	ENST00000258168.6	Ensembl
Affymetrix Human Clariom D Assay	PSR1600163996.hg.1	ENST00000563804.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1600163996.hg.1	ENST00000564552.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1600163996.hg.1	NM_017429.2	Refseq
Affymetrix Human Clariom D Assay	PSR1600163993.hg.1	ENST00000258168.6	Ensembl
Affymetrix Human Clariom D Assay	PSR1600163993.hg.1	ENST00000563804.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1600163993.hg.1	ENST00000564552.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1600163993.hg.1	NM_017429.2	Refseq
Affymetrix Human Clariom D Assay	PSR1600163993.hg.1	TC1600008577.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1600163993.hg.1	ENST00000258168.6	Ensembl
Affymetrix Human Clariom D Assay	PSR1600163993.hg.1	ENST00000563804.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1600163993.hg.1	ENST00000564552.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1600163993.hg.1	NM_017429.2	Refseq
Affymetrix Human Clariom D Assay	PSR1600163995.hg.1	ENST00000258168.6	Ensembl
Affymetrix Human Clariom D Assay	PSR1600163995.hg.1	ENST00000563804.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1600163995.hg.1	ENST00000564552.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1600163995.hg.1	NM_017429.2	Refseq
Affymetrix Human Clariom D Assay	PSR1600163995.hg.1	TC1600008577.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1600163995.hg.1	ENST00000258168.6	Ensembl
Affymetrix Human Clariom D Assay	PSR1600163995.hg.1	ENST00000563804.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1600163995.hg.1	ENST00000564552.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1600163995.hg.1	NM_017429.2	Refseq
Affymetrix Human Clariom D Assay	TC1600008577.hg.1	ENST00000258168.6	Ensembl
Affymetrix Human Clariom D Assay	TC1600008577.hg.1	ENST00000258168.6	Ensembl
Affymetrix Human Clariom D Assay	TC1600008577.hg.1	ENST00000258168.6	Ensembl
Affymetrix Human Clariom D Assay	TC1600008577.hg.1	ENST00000258168.6	Ensembl
Affymetrix Human Clariom D Assay	TC1600008577.hg.1	ENST00000258168.6	Ensembl
Affymetrix Human Clariom D Assay	TC1600008577.hg.1	ENST00000258168.6	Ensembl
Affymetrix Human Clariom D Assay	TC1600008577.hg.1	ENST00000258168.6	Ensembl
Affymetrix Human Clariom D Assay	TC1600008577.hg.1	ENST00000258168.6	Ensembl
Affymetrix Human Clariom D Assay	TC1600008577.hg.1	ENST00000258168.6	Ensembl
Affymetrix Human Clariom D Assay	TC1600008577.hg.1	ENST00000258168.6	Ensembl
Affymetrix Human Clariom D Assay	TC1600008577.hg.1	ENST00000258168.6	Ensembl
Affymetrix Human Clariom D Assay	TC1600008577.hg.1	ENST00000258168.6	Ensembl
Affymetrix Human Clariom D Assay	TC1600008577.hg.1	ENST00000258168.6	Ensembl
Affymetrix Human Clariom D Assay	TC1600008577.hg.1	ENST00000258168.6	Ensembl
Affymetrix Human Clariom D Assay	TC1600008577.hg.1	ENST00000258168.6	Ensembl
Affymetrix Human Clariom D Assay	TC1600008577.hg.1	ENST00000258168.6	Ensembl
Affymetrix Human Clariom D Assay	TC1600008577.hg.1	ENST00000258168.6	Ensembl
Affymetrix Human Clariom D Assay	TC1600008577.hg.1	ENST00000563804.5	Ensembl
Affymetrix Human Clariom D Assay	TC1600008577.hg.1	ENST00000563804.5	Ensembl
Affymetrix Human Clariom D Assay	TC1600008577.hg.1	ENST00000563804.5	Ensembl
Affymetrix Human Clariom D Assay	TC1600008577.hg.1	ENST00000563804.5	Ensembl
Affymetrix Human Clariom D Assay	TC1600008577.hg.1	ENST00000563804.5	Ensembl
Affymetrix Human Clariom D Assay	TC1600008577.hg.1	ENST00000563804.5	Ensembl
Affymetrix Human Clariom D Assay	TC1600008577.hg.1	ENST00000563804.5	Ensembl
Affymetrix Human Clariom D Assay	TC1600008577.hg.1	ENST00000563804.5	Ensembl
Affymetrix Human Clariom D Assay	TC1600008577.hg.1	ENST00000563804.5	Ensembl
Affymetrix Human Clariom D Assay	TC1600008577.hg.1	ENST00000563804.5	Ensembl
Affymetrix Human Clariom D Assay	TC1600008577.hg.1	ENST00000563804.5	Ensembl
Affymetrix Human Clariom D Assay	TC1600008577.hg.1	ENST00000563804.5	Ensembl
Affymetrix Human Clariom D Assay	TC1600008577.hg.1	ENST00000563804.5	Ensembl
Affymetrix Human Clariom D Assay	TC1600008577.hg.1	ENST00000563804.5	Ensembl
Affymetrix Human Clariom D Assay	TC1600008577.hg.1	ENST00000564552.1	Ensembl
Affymetrix Human Clariom D Assay	TC1600008577.hg.1	ENST00000564552.1	Ensembl
Affymetrix Human Clariom D Assay	TC1600008577.hg.1	ENST00000564552.1	Ensembl
Affymetrix Human Clariom D Assay	TC1600008577.hg.1	ENST00000564552.1	Ensembl
Affymetrix Human Clariom D Assay	TC1600008577.hg.1	ENST00000564552.1	Ensembl
Affymetrix Human Clariom D Assay	TC1600008577.hg.1	ENST00000564552.1	Ensembl
Affymetrix Human Clariom D Assay	TC1600008577.hg.1	ENST00000564552.1	Ensembl
Affymetrix Human Clariom D Assay	TC1600008577.hg.1	NM_017429.2	Refseq
Affymetrix Human Clariom D Assay	TC1600008577.hg.1	NM_017429.2	Refseq
Affymetrix Human Clariom D Assay	TC1600008577.hg.1	NM_017429.2	Refseq
Affymetrix Human Clariom D Assay	TC1600008577.hg.1	NM_017429.2	Refseq
Affymetrix Human Clariom D Assay	TC1600008577.hg.1	NM_017429.2	Refseq
Affymetrix Human Clariom D Assay	TC1600008577.hg.1	NM_017429.2	Refseq
Affymetrix Human Clariom D Assay	TC1600008577.hg.1	NM_017429.2	Refseq
Affymetrix Human Clariom D Assay	TC1600008577.hg.1	NM_017429.2	Refseq
Affymetrix Human Clariom D Assay	TC1600008577.hg.1	NM_017429.2	Refseq
Affymetrix Human Clariom D Assay	TC1600008577.hg.1	NM_017429.2	Refseq
Affymetrix Human Clariom D Assay	TC1600008577.hg.1	NM_017429.2	Refseq
Affymetrix Human Clariom D Assay	TC1600008577.hg.1	NM_017429.2	Refseq
Affymetrix Human Clariom D Assay	TC1600008577.hg.1	NM_017429.2	Refseq
Affymetrix Human Clariom D Assay	TC1600008577.hg.1	NM_017429.2	Refseq
Affymetrix Human Clariom D Assay	TC1600008577.hg.1	NM_017429.2	Refseq
Affymetrix Human Clariom D Assay	TC1600008577.hg.1	NM_017429.2	Refseq