Hs01020199_m1

• Gene Symbol: LINC00208
• Gene Name: long intergenic non-protein coding RNA 208
• Gene Aliases: C8orf14, NCRNA00208, VIR35
• Chromosome Location: Chr.8: 11576535 - 11581341 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: LINC00208
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_040035.1		1 - 2	781		108
GenBank mRNA	AJ291678.1	-	1 - 2	781		108

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	BLK proto-oncogene, Src family tyrosine kinase	BLK	MODY11	-11.9kb	Sense	Chr. 8 - 11493991 - 11564599 on NCBI Build GRCh38
Downstream	GATA binding protein 4	GATA4	ASD2, TACHD, TOF, VSD1	98.3kb	Sense	Chr. 8 - 11676919 - 11760002 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0800006749.hg.1
This assay targets the same location as HTA transcript cluster(s) TC08000088.hg.1

Additional Information:

This assay is in the 5'UTR region of the AJ291678.1 transcripts.

• Set Membership: Amplicon length greater than or equal to 101, Homo sapiens, Probe spans exons

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR08000836.hg.1	TC08000088.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR08000836.hg.1	ENST00000304233.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR08000836.hg.1	NR_040035.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR08000835.hg.1	TC08000088.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR08000835.hg.1	ENST00000304233.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR08000835.hg.1	NR_040035.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0800006749.hg.1	ENST00000304233.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0800006749.hg.1	ENST00000304233.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0800006749.hg.1	ENST00000304233.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0800006749.hg.1	ENST00000304233.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0800006749.hg.1	NR_040035.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0800006749.hg.1	NR_040035.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0800006749.hg.1	NR_040035.1	Refseq
Affymetrix Human Clariom D Assay	PSR0800145722.hg.1	ENST00000304233.3	Ensembl
Affymetrix Human Clariom D Assay	PSR0800145722.hg.1	NR_040035.1	Refseq
Affymetrix Human Clariom D Assay	PSR0800145722.hg.1	ENST00000304233.3	Ensembl
Affymetrix Human Clariom D Assay	PSR0800145722.hg.1	NR_040035.1	Refseq
Affymetrix Human Clariom D Assay	PSR0800145722.hg.1	TC0800006749.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	TC0800006749.hg.1	ENST00000304233.3	Ensembl
Affymetrix Human Clariom D Assay	TC0800006749.hg.1	ENST00000304233.3	Ensembl
Affymetrix Human Clariom D Assay	TC0800006749.hg.1	ENST00000304233.3	Ensembl
Affymetrix Human Clariom D Assay	TC0800006749.hg.1	ENST00000304233.3	Ensembl
Affymetrix Human Clariom D Assay	TC0800006749.hg.1	NR_040035.1	Refseq
Affymetrix Human Clariom D Assay	TC0800006749.hg.1	NR_040035.1	Refseq
Affymetrix Human Clariom D Assay	TC0800006749.hg.1	NR_040035.1	Refseq
Affymetrix Human Clariom D Assay	PSR0800145723.hg.1	ENST00000304233.3	Ensembl
Affymetrix Human Clariom D Assay	PSR0800145723.hg.1	NR_040035.1	Refseq
Affymetrix Human Clariom D Assay	PSR0800145723.hg.1	ENST00000304233.3	Ensembl
Affymetrix Human Clariom D Assay	PSR0800145723.hg.1	NR_040035.1	Refseq
Affymetrix Human Clariom D Assay	PSR0800145723.hg.1	TC0800006749.hg.1	Clariom D TC