Hs01023244_m1

• Gene Symbol: CHD6
• Gene Name: chromodomain helicase DNA binding protein 6
• Gene Aliases: CHD-6, CHD5, RIGB
• Chromosome Location: Chr.20: 41402101 - 41618494 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: CHD6
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_032221.4	NP_115597.3	28 - 29	4311		87
	XM_005260573.2	XP_005260630.1	27 - 28	4133		87
	XM_011529080.2	XP_011527382.1	27 - 28	4372		87
	XM_011529082.2	XP_011527384.1	17 - 18	2544		87
	XM_017028099.1	XP_016883588.1	27 - 28	5807		87
	XM_017028100.1	XP_016883589.1	27 - 28	4332		87
	XM_017028101.1	XP_016883590.1	26 - 27	5663		87
	XM_017028102.1	XP_016883591.1	27 - 28	5806		87
	XM_017028103.1	XP_016883592.1	25 - 26	3766		87
	XM_017028104.1	XP_016883593.1	27 - 28	5807		87
GenBank mRNA	AB037756.2	-	14 - 15	2112		87
	AK026022.1	-	13 - 14	1860		87
	AK091551.1	-	15 - 16	2216		87
	AY034072.1	-	28 - 29	4311		87

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC2000009134.hg.1
This assay targets the same location as HTA transcript cluster(s) TC20000850.hg.1

• Set Membership: Ambion siRNA available, Amplicon length between 86 and 100, Homo sapiens, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene CHD6

Gene Ontology Categories:

Process(es)

transcription, DNA-templated
covalent chromatin modification
positive regulation of transcription from RNA polymerase II promoter in response to oxidative stress

Function(s)

transcription cofactor binding
DNA binding
ATP binding
ATP-dependent helicase activity
DNA-dependent ATPase activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR20011652.hg.1	ENST00000373233.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR20011652.hg.1	NM_032221.4	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR20011652.hg.1	TC20000850.hg.1	HTA TC
Affymetrix Human Clariom D Assay	PSR2000163968.hg.1	ENST00000373233.7	Ensembl
Affymetrix Human Clariom D Assay	PSR2000163968.hg.1	NM_032221.4	Refseq
Affymetrix Human Clariom D Assay	PSR2000163968.hg.1	TC2000009134.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR2000163968.hg.1	ENST00000373233.7	Ensembl
Affymetrix Human Clariom D Assay	PSR2000163968.hg.1	NM_032221.4	Refseq