Hs01024799_m1

• Gene Symbol: SMARCC1
• Gene Name: SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1
• Gene Aliases: BAF155, CRACC1, Rsc8, SRG3, SWI3
• Chromosome Location: Chr.3: 47585888 - 47781915 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: SMARCC1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_003074.3	NP_003065.3	22 - 23	2499		71
	XM_011534034.1	XP_011532336.1	22 - 23	2230		71
GenBank mRNA	AK302541.1	-	23 - 24	2274		71
	BC021862.1	-	22 - 23	2436		71
	BC032564.1	-	22 - 23	2483		71
	BC039843.1	-	22 - 23	2403		71
	BC040242.1	-	7 - 8	931		71
	BC050564.1	-	22 - 23	2428	3912713	71
	BC065253.1	-	22 - 23	2468		71
	BC113465.1	-	22 - 23	2447	8322517	71
	BC117213.1	-	22 - 23	2447	40125764	71
	U66615.1	-	22 - 23	2432		71

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0300010990.hg.1
This assay targets the same location as HTA transcript cluster(s) TC03001370.hg.1

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, Mammalian Gene Collection, Homo sapiens, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene SMARCC1

Panther Classification:

Molecular Function -

chromatin/chromatin-binding, or -regulatory protein

Gene Ontology Categories:

Process(es)

nucleosome disassembly
chromatin remodeling
transcription, DNA-templated
regulation of transcription from RNA polymerase II promoter
nervous system development
insulin receptor signaling pathway
organ morphogenesis
covalent chromatin modification
prostate gland development
negative regulation of proteasomal ubiquitin-dependent protein catabolic process
ATP-dependent chromatin remodeling
positive regulation of transcription, DNA-templated
positive regulation of transcription from RNA polymerase II promoter

Function(s)

RNA polymerase II core promoter proximal region sequence-specific DNA binding
RNA polymerase II distal enhancer sequence-specific DNA binding
transcription coactivator activity
protein binding
nucleosomal DNA binding
protein N-terminus binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR03023607.hg.1	TC03001370.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR03023607.hg.1	ENST00000254480.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR03023607.hg.1	ENST00000425518.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR03023607.hg.1	NM_003074.3	Refseq
Affymetrix Human Clariom D Assay	PSR0300180330.hg.1	ENST00000254480.9	Ensembl
Affymetrix Human Clariom D Assay	PSR0300180330.hg.1	ENST00000425518.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0300180330.hg.1	NM_003074.3	Refseq
Affymetrix Human Clariom D Assay	PSR0300180330.hg.1	ENST00000254480.9	Ensembl
Affymetrix Human Clariom D Assay	PSR0300180330.hg.1	ENST00000425518.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0300180330.hg.1	NM_003074.3	Refseq
Affymetrix Human Clariom D Assay	PSR0300180330.hg.1	TC0300010990.hg.1	Clariom D TC