Hs01031023_m1

• Gene Symbol: HPS4
• Gene Name: HPS4, biogenesis of lysosomal organelles complex 3 subunit 2
• Gene Aliases: BLOC3S2, LE
• Chromosome Location: Chr.22: 26443613 - 26483863 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: HPS4
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_073135.1		1 - 2	96		117
	XM_006724354.3	XP_006724417.1	1 - 2	83		117
	XM_011530486.2	XP_011528788.1	1 - 2	83		117
	XM_017029042.1	XP_016884531.1	1 - 2	83		117
	XM_017029049.1	XP_016884538.1	1 - 2	83		117
	XM_017029051.1	XP_016884540.1	1 - 2	83		117
	XM_017029058.1	XP_016884547.1	1 - 2	61		117
	XM_017029059.1	XP_016884548.1	1 - 2	87		117
	XM_017029063.1	XP_016884552.1	1 - 2	87		117
	XM_017029064.1	XP_016884553.1	1 - 2	61		117
GenBank mRNA	BC028625.1	-	1 - 2	92		117
	BC050285.1	-	1 - 2	69		117

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC2200009328.hg.1

Additional Information:

This assay is in the 5'UTR region of the XM_006724354.3,XM_011530486.2,XM_017029042.1,XM_017029049.1,XM_017029051.1,XM_017029058.1,XM_017029059.1,XM_017029063.1,XM_017029064.1 transcripts.

• Set Membership: Amplicon length greater than or equal to 101, Mammalian Gene Collection, Homo sapiens, 1700, Probe spans exons

Gene Ontology Categories:

Process(es)

protein targeting
lysosome organization
blood coagulation
hemostasis
melanocyte differentiation
positive regulation of eye pigmentation
protein stabilization
positive regulation of protein targeting to mitochondrion

Function(s)

protein binding
protein homodimerization activity
protein dimerization activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Clariom D Assay	PSR2200170009.hg.1	TC2200009328.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR2200170009.hg.1	NM_022081.5	Refseq
Affymetrix Human Clariom D Assay	PSR2200170009.hg.1	NR_073135.1	Refseq
Affymetrix Human Clariom D Assay	PSR2200170009.hg.1	NM_022081.5	Refseq
Affymetrix Human Clariom D Assay	PSR2200170009.hg.1	NR_073135.1	Refseq
Affymetrix Human Clariom D Assay	PSR2200169999.hg.1	TC2200009328.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR2200169999.hg.1	ENST00000336873.9	Ensembl
Affymetrix Human Clariom D Assay	PSR2200169999.hg.1	ENST00000398145.6	Ensembl
Affymetrix Human Clariom D Assay	PSR2200169999.hg.1	ENST00000422379.2	Ensembl
Affymetrix Human Clariom D Assay	PSR2200169999.hg.1	ENST00000439453.5	Ensembl
Affymetrix Human Clariom D Assay	PSR2200169999.hg.1	ENST00000466781.5	Ensembl
Affymetrix Human Clariom D Assay	PSR2200169999.hg.1	ENST00000473782.1	Ensembl
Affymetrix Human Clariom D Assay	PSR2200169999.hg.1	ENST00000479064.5	Ensembl
Affymetrix Human Clariom D Assay	PSR2200169999.hg.1	ENST00000483631.1	Ensembl
Affymetrix Human Clariom D Assay	PSR2200169999.hg.1	NM_022081.5	Refseq
Affymetrix Human Clariom D Assay	PSR2200169999.hg.1	NR_073135.1	Refseq
Affymetrix Human Clariom D Assay	PSR2200169999.hg.1	ENST00000336873.9	Ensembl
Affymetrix Human Clariom D Assay	PSR2200169999.hg.1	ENST00000398145.6	Ensembl
Affymetrix Human Clariom D Assay	PSR2200169999.hg.1	ENST00000422379.2	Ensembl
Affymetrix Human Clariom D Assay	PSR2200169999.hg.1	ENST00000439453.5	Ensembl
Affymetrix Human Clariom D Assay	PSR2200169999.hg.1	ENST00000466781.5	Ensembl
Affymetrix Human Clariom D Assay	PSR2200169999.hg.1	ENST00000473782.1	Ensembl
Affymetrix Human Clariom D Assay	PSR2200169999.hg.1	ENST00000479064.5	Ensembl
Affymetrix Human Clariom D Assay	PSR2200169999.hg.1	ENST00000483631.1	Ensembl
Affymetrix Human Clariom D Assay	PSR2200169999.hg.1	NM_022081.5	Refseq
Affymetrix Human Clariom D Assay	PSR2200169999.hg.1	NR_073135.1	Refseq

Array Name	Probe IDs	Targets	Target Type
ABI Human Genome Survey Microarray Version 2.0	131962	-	-