Hs01035710_g1

Gene Symbol:

PPT2 PPT2-EGFL8

Gene Name:

palmitoyl-protein thioesterase 2

PPT2-EGFL8 readthrough (NMD candidate)

Gene Aliases:

C6orf8, G14, PPT-2

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Chromosome Location:

Chr.6: 32153452 - 32163681 on Build GRCh38

Chromosome Location:

Chr.6: 32153999 - 32168285 on Build GRCh38

Species:

Human

Species Specific ID (Flybase ID):

-

-

Assay Details

Gene Symbol: PPT2
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001204103.1	NP_001191032.1	3 - 4	741		91
	NM_005155.6	NP_005146.4	3 - 4	751		91
	NM_138717.2	NP_619731.2	3 - 4	530		91
GenBank mRNA	AF020543.1	-	3 - 4	696		91
	AL110128.1	-	3 - 4	458		91
	BC001355.2	-	3 - 4	565	3050231	91
	CR533546.1	-	2 - 3	355		91
	Y17958.1	-	3 - 4	645		91

Gene Symbol: PPT2-EGFL8
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_037861.1		3 - 4	751		91
GenBank mRNA	AB209572.1	-	18 - 19			91
	AF020544.1	-	3 - 4	905		91
	AK290473.1	-	3 - 4	606		91

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0600007635.hg.1
This assay targets the same location as HTA transcript cluster(s) TC06000394.hg.1, TC6_apd_hap1000043.hg.1, TC6_cox_hap2000086.hg.1, TC6_dbb_hap3000080.hg.1, TC6_mann_hap4000070.hg.1, TC6_mcf_hap5000072.hg.1, TC6_qbl_hap6000077.hg.1, TC6_ssto_hap7000072.hg.1

• Set Membership: Ambion siRNA available, Amplicon length between 86 and 100, Mammalian Gene Collection, Detect Genomic DNA, Homo sapiens, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene PPT2
Click here to find siRNAs for Gene PPT2-EGFL8

Panther Classification:

Molecular Function -

protein modifying enzyme, acyltransferase

Gene Ontology Categories:

Process(es)

long-chain fatty-acyl-CoA biosynthetic process
macromolecule depalmitoylation

Function(s)

palmitoyl-(protein) hydrolase activity
thiolester hydrolase activity
palmitoyl hydrolase activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR06004543.hg.1	TC06000394.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR06004543.hg.1	ENST00000324816.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR06004543.hg.1	ENST00000361568.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR06004543.hg.1	ENST00000375137.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR06004543.hg.1	ENST00000375143.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR06004543.hg.1	ENST00000395523.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR06004543.hg.1	ENST00000422437.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR06004543.hg.1	ENST00000437001.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR06004543.hg.1	ENST00000445576.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR06004543.hg.1	NM_001204103.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR06004543.hg.1	NM_005155.6	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR06004543.hg.1	NM_138717.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR06004543.hg.1	NR_037861.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_dbb_hap3001701.hg.1	TC6_dbb_hap3000080.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR6_dbb_hap3001701.hg.1	NM_001204103.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_dbb_hap3001701.hg.1	NM_005155.6	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_dbb_hap3001701.hg.1	NM_138717.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_dbb_hap3001701.hg.1	NR_037861.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_cox_hap2001652.hg.1	TC6_cox_hap2000086.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR6_cox_hap2001652.hg.1	NM_001204103.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_cox_hap2001652.hg.1	NM_005155.6	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_cox_hap2001652.hg.1	NM_138717.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_cox_hap2001652.hg.1	NR_037861.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_qbl_hap6001613.hg.1	TC6_qbl_hap6000077.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR6_qbl_hap6001613.hg.1	NM_001204103.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_qbl_hap6001613.hg.1	NM_005155.6	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_qbl_hap6001613.hg.1	NM_138717.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_qbl_hap6001613.hg.1	NR_037861.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_mcf_hap5001424.hg.1	TC6_mcf_hap5000072.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR6_mcf_hap5001424.hg.1	NM_001204103.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_mcf_hap5001424.hg.1	NM_005155.6	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_mcf_hap5001424.hg.1	NM_138717.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_mcf_hap5001424.hg.1	NR_037861.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_ssto_hap7001477.hg.1	TC6_ssto_hap7000072.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR6_ssto_hap7001477.hg.1	NM_001204103.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_ssto_hap7001477.hg.1	NM_005155.6	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_ssto_hap7001477.hg.1	NM_138717.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_ssto_hap7001477.hg.1	NR_037861.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_apd_hap1000571.hg.1	TC6_apd_hap1000043.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR6_apd_hap1000571.hg.1	NM_001204103.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_apd_hap1000571.hg.1	NM_005155.6	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_apd_hap1000571.hg.1	NM_138717.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_apd_hap1000571.hg.1	NR_037861.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_mann_hap4001242.hg.1	TC6_mann_hap4000070.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR6_mann_hap4001242.hg.1	NM_001204103.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_mann_hap4001242.hg.1	NM_005155.6	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_mann_hap4001242.hg.1	NM_138717.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_mann_hap4001242.hg.1	NR_037861.1	Refseq
Affymetrix Human Clariom D Assay	PSR0600152715.hg.1	ENST00000324816.10	Ensembl
Affymetrix Human Clariom D Assay	PSR0600152715.hg.1	ENST00000361568.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0600152715.hg.1	ENST00000375137.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0600152715.hg.1	ENST00000375143.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0600152715.hg.1	ENST00000395523.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0600152715.hg.1	ENST00000414204.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0600152715.hg.1	ENST00000422437.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0600152715.hg.1	ENST00000428388.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0600152715.hg.1	ENST00000436118.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0600152715.hg.1	ENST00000453656.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0600152715.hg.1	ENST00000465047.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0600152715.hg.1	ENST00000478521.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0600152715.hg.1	ENST00000583227.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0600152715.hg.1	ENST00000585246.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0600152715.hg.1	NM_001204103.1	Refseq
Affymetrix Human Clariom D Assay	PSR0600152715.hg.1	NM_005155.6	Refseq
Affymetrix Human Clariom D Assay	PSR0600152715.hg.1	NR_037861.1	Refseq
Affymetrix Human Clariom D Assay	PSR0600152715.hg.1	ENST00000324816.10	Ensembl
Affymetrix Human Clariom D Assay	PSR0600152715.hg.1	ENST00000361568.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0600152715.hg.1	ENST00000375137.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0600152715.hg.1	ENST00000375143.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0600152715.hg.1	ENST00000395523.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0600152715.hg.1	ENST00000414204.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0600152715.hg.1	ENST00000422437.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0600152715.hg.1	ENST00000428388.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0600152715.hg.1	ENST00000436118.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0600152715.hg.1	ENST00000453656.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0600152715.hg.1	ENST00000465047.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0600152715.hg.1	ENST00000478521.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0600152715.hg.1	ENST00000583227.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0600152715.hg.1	ENST00000585246.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0600152715.hg.1	NM_001204103.1	Refseq
Affymetrix Human Clariom D Assay	PSR0600152715.hg.1	NM_005155.6	Refseq
Affymetrix Human Clariom D Assay	PSR0600152715.hg.1	NR_037861.1	Refseq
Affymetrix Human Clariom D Assay	PSR0600152715.hg.1	TC0600007635.hg.1	Clariom D TC