Hs01038916_m1

• Gene Symbol: PIKFYVE
• Gene Name: phosphoinositide kinase, FYVE-type zinc finger containing
• Gene Aliases: CFD, FAB1, HEL37, PIP5K, PIP5K3, ZFYVE29
• Chromosome Location: Chr.2: 208266178 - 208358751 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: PIKFYVE
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_015040.3	NP_055855.2	36 - 37	5589		105
	XM_011510778.2	XP_011509080.1	37 - 38	5639		105
	XM_011510779.2	XP_011509081.1	37 - 38	5572		105
	XM_011510780.2	XP_011509082.1	37 - 38	5657		105
	XM_011510781.2	XP_011509083.1	37 - 38	5580		105
	XM_011510783.2	XP_011509085.1	36 - 37	5471		105
	XM_011510784.2	XP_011509086.1	36 - 37	5489		105
	XM_011510785.2	XP_011509087.1	36 - 37	5411		105
	XM_011510786.2	XP_011509088.1	35 - 36	5306		105
	XM_011510787.1	XP_011509089.1	35 - 36	5315		105
	XM_011510788.1	XP_011509090.1	34 - 35	5298		105
	XM_011510789.2	XP_011509091.1	33 - 34	5120		105
	XM_011510790.1	XP_011509092.1	35 - 36	5417		105
	XM_017003568.1	XP_016859057.1	36 - 37	5475		105
	XM_017003569.1	XP_016859058.1	35 - 36	5307		105
	XM_017003570.1	XP_016859059.1	33 - 34	5156		105
	XM_017003571.1	XP_016859060.1	32 - 33	4952		105
	XM_017003572.1	XP_016859061.1	35 - 36	5293		105
	XM_017003573.1	XP_016859062.1	32 - 33	5001		105
	XM_017003574.1	XP_016859063.1	31 - 32	4672		105
GenBank mRNA	AB023198.1	-	9 - 10	872		105
	AK091482.1	-	17 - 18	2325		105
	AY457063.1	-	36 - 37	5593		105
	EU794609.1	-	36 - 37	5593		105

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0200010624.hg.1
This assay targets the same location as HTA transcript cluster(s) TC02001235.hg.1

• Set Membership: Ambion siRNA available, Amplicon length greater than or equal to 101, Homo sapiens, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene PIKFYVE

Panther Classification:

Molecular Function -

kinase, transferase, metabolite interconversion enzyme

Gene Ontology Categories:

Process(es)

phosphatidylinositol biosynthetic process
receptor-mediated endocytosis
myelin assembly
protein localization to nucleus
intracellular signal transduction
phosphatidylinositol-3-phosphate biosynthetic process
retrograde transport, endosome to Golgi
phosphatidylinositol phosphorylation
phosphatidylinositol 5-phosphate metabolic process
regulation of autophagosome assembly

Function(s)

1-phosphatidylinositol-3-phosphate 5-kinase activity
protein binding
ATP binding
zinc ion binding
1-phosphatidylinositol-4-phosphate 5-kinase activity
phosphatidylinositol-3,5-bisphosphate 5-phosphatase activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR02018942.hg.1	TC02001235.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR02018942.hg.1	ENST00000264380.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR02018942.hg.1	ENST00000392200.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR02018942.hg.1	NM_015040.3	Refseq
Affymetrix Human Clariom D Assay	PSR0200175302.hg.1	ENST00000264380.8	Ensembl
Affymetrix Human Clariom D Assay	PSR0200175302.hg.1	NM_015040.3	Refseq
Affymetrix Human Clariom D Assay	PSR0200175302.hg.1	ENST00000264380.8	Ensembl
Affymetrix Human Clariom D Assay	PSR0200175302.hg.1	NM_015040.3	Refseq
Affymetrix Human Clariom D Assay	PSR0200175302.hg.1	TC0200010624.hg.1	Clariom D TC