Hs01048852_m1

• Gene Symbol: NFX1
• Gene Name: nuclear transcription factor, X-box binding 1
• Gene Aliases: NFX2, TEG-42, Tex42
• Chromosome Location: Chr.9: 33290417 - 33371163 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: NFX1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_002504.5	NP_002495.2	11 - 12	2187		72
	NM_147134.3	NP_667345.1	11 - 12	2187		72
GenBank mRNA	AF332009.1	-	11 - 12	2092		72
	AK225750.1	-	11 - 12	2060		72
	BC006447.1	-	10 - 11	1684		72
	BC012151.1	-	11 - 12	2057	4558442	72
	U15306.1	-	10 - 11	1983		72

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0900006970.hg.1
This assay targets the same location as HTA transcript cluster(s) TC09000140.hg.1

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, Mammalian Gene Collection, Homo sapiens, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene NFX1

Gene Ontology Categories:

Process(es)

negative regulation of transcription by RNA polymerase II
transcription by RNA polymerase II
inflammatory response
viral process
negative regulation of MHC class II biosynthetic process

Function(s)

RNA polymerase II transcription regulatory region sequence-specific DNA binding
DNA-binding transcription factor activity
RNA binding
zinc ion binding
ligase activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR09001579.hg.1	ENST00000263220.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR09001579.hg.1	ENST00000318524.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR09001579.hg.1	ENST00000379521.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR09001579.hg.1	ENST00000379540.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR09001579.hg.1	ENST00000536210.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR09001579.hg.1	NM_002504.5	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR09001579.hg.1	NM_147134.3	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR09001579.hg.1	TC09000140.hg.1	HTA TC
Affymetrix Human Clariom D Assay	PSR0900147308.hg.1	ENST00000318524.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0900147308.hg.1	ENST00000379521.8	Ensembl
Affymetrix Human Clariom D Assay	PSR0900147308.hg.1	ENST00000379540.7	Ensembl
Affymetrix Human Clariom D Assay	PSR0900147308.hg.1	NM_002504.5	Refseq
Affymetrix Human Clariom D Assay	PSR0900147308.hg.1	NM_147134.3	Refseq
Affymetrix Human Clariom D Assay	PSR0900147308.hg.1	TC0900006970.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0900147308.hg.1	NM_002504.5	Refseq
Affymetrix Human Clariom D Assay	PSR0900147308.hg.1	ENST00000318524.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0900147308.hg.1	ENST00000379521.8	Ensembl
Affymetrix Human Clariom D Assay	PSR0900147308.hg.1	ENST00000379540.7	Ensembl
Affymetrix Human Clariom D Assay	PSR0900147308.hg.1	NM_147134.3	Refseq