Hs01055545_g1

• Gene Symbol: SETDB1
• Gene Name: SET domain bifurcated 1
• Gene Aliases: ESET, H3-K9-HMTase4, KG1T, KMT1E, TDRD21
• Chromosome Location: Chr.1: 150926246 - 150964744 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: SETDB1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001145415.1	NP_001138887.1	11 - 12	1618		79
	NM_012432.3	NP_036564.3	11 - 12	1618		79
GenBank mRNA	BC028671.2	-	11 - 12	1545	4098658	79
	D31891.1	-	11 - 12	1514		79

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0100009929.hg.1
This assay targets the same location as HTA transcript cluster(s) TC01001194.hg.1

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, Mammalian Gene Collection, Detect Genomic DNA, Homo sapiens, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene SETDB1

Gene Ontology Categories:

Process(es)

transcription, DNA-templated
Ras protein signal transduction
response to vitamin
histone lysine methylation
response to ethanol
positive regulation of DNA methylation-dependent heterochromatin assembly

Function(s)

DNA binding
chromatin binding
protein binding
zinc ion binding
histone-lysine N-methyltransferase activity
promoter-specific chromatin binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR01018415.hg.1	ENST00000271640.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR01018415.hg.1	ENST00000368969.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR01018415.hg.1	NM_001145415.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR01018415.hg.1	NM_012432.3	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR01018415.hg.1	TC01001194.hg.1	HTA TC
Affymetrix Human Clariom D Assay	PSR0100171759.hg.1	ENST00000271640.9	Ensembl
Affymetrix Human Clariom D Assay	PSR0100171759.hg.1	ENST00000368969.8	Ensembl
Affymetrix Human Clariom D Assay	PSR0100171759.hg.1	ENST00000498193.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0100171759.hg.1	ENST00000534805.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0100171759.hg.1	NM_001145415.1	Refseq
Affymetrix Human Clariom D Assay	PSR0100171759.hg.1	NM_012432.3	Refseq
Affymetrix Human Clariom D Assay	PSR0100171759.hg.1	TC0100009929.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0100171759.hg.1	ENST00000498193.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0100171759.hg.1	ENST00000271640.9	Ensembl
Affymetrix Human Clariom D Assay	PSR0100171759.hg.1	ENST00000368969.8	Ensembl
Affymetrix Human Clariom D Assay	PSR0100171759.hg.1	ENST00000534805.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0100171759.hg.1	NM_001145415.1	Refseq
Affymetrix Human Clariom D Assay	PSR0100171759.hg.1	NM_012432.3	Refseq