Hs01057052_m1

• Gene Symbol: CTR9
• Gene Name: CTR9 homolog, Paf1/RNA polymerase II complex component
• Gene Aliases: SH2BP1, TSBP, p150, p150TSP
• Chromosome Location: Chr.11: 10750987 - 10779755 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: CTR9
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_014633.4	NP_055448.1	4 - 5	929		124
GenBank mRNA	AK291794.1	-	4 - 5	665		124
	BC058914.1	-	4 - 5	676	6527835	124
	D63875.1	-	4 - 5	589		124

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC1100006840.hg.1
This assay targets the same location as HTA transcript cluster(s) TC11000187.hg.1

• Set Membership: Ambion siRNA available, Amplicon length greater than or equal to 101, Mammalian Gene Collection, Homo sapiens, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene CTR9

Panther Classification:

Molecular Function -

RNA metabolism protein, nucleic acid metabolism protein, general transcription factor

Gene Ontology Categories:

Process(es)

negative regulation of transcription from RNA polymerase II promoter
endodermal cell fate commitment
inner cell mass cell differentiation
trophectodermal cell differentiation
blastocyst growth
transcription, DNA-templated
JAK-STAT cascade
histone monoubiquitination
Wnt signaling pathway
stem cell population maintenance
positive regulation of transcription elongation from RNA polymerase II promoter
histone H2B ubiquitination
negative regulation of myeloid cell differentiation
positive regulation of transcription from RNA polymerase II promoter
positive regulation of histone H3-K4 methylation
interleukin-6-mediated signaling pathway
cellular response to lipopolysaccharide
histone H3-K4 trimethylation
negative regulation of mRNA polyadenylation
regulation of genetic imprinting
positive regulation of histone H3-K79 methylation
positive regulation of histone H2B ubiquitination

Function(s)

RNA polymerase II core binding
protein binding
SH2 domain binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	TC1100006840.hg.1	ENST00000361367.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100006840.hg.1	ENST00000361367.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100006840.hg.1	ENST00000361367.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100006840.hg.1	ENST00000361367.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100006840.hg.1	ENST00000361367.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100006840.hg.1	ENST00000361367.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100006840.hg.1	ENST00000361367.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100006840.hg.1	ENST00000361367.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100006840.hg.1	ENST00000361367.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100006840.hg.1	ENST00000361367.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100006840.hg.1	ENST00000361367.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100006840.hg.1	ENST00000361367.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100006840.hg.1	ENST00000361367.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100006840.hg.1	ENST00000361367.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100006840.hg.1	ENST00000361367.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100006840.hg.1	ENST00000361367.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100006840.hg.1	ENST00000361367.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100006840.hg.1	ENST00000361367.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100006840.hg.1	ENST00000361367.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100006840.hg.1	ENST00000361367.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100006840.hg.1	ENST00000361367.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100006840.hg.1	ENST00000361367.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100006840.hg.1	ENST00000361367.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100006840.hg.1	ENST00000361367.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100006840.hg.1	ENST00000361367.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100006840.hg.1	ENST00000361367.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100006840.hg.1	ENST00000361367.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100006840.hg.1	ENST00000361367.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100006840.hg.1	ENST00000361367.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100006840.hg.1	ENST00000524523.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100006840.hg.1	ENST00000524523.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100006840.hg.1	ENST00000524523.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100006840.hg.1	ENST00000524523.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100006840.hg.1	ENST00000524523.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100006840.hg.1	ENST00000524523.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100006840.hg.1	ENST00000524523.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100006840.hg.1	ENST00000526874.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100006840.hg.1	ENST00000526874.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100006840.hg.1	ENST00000526874.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100006840.hg.1	ENST00000526874.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100006840.hg.1	ENST00000526874.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100006840.hg.1	ENST00000529355.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100006840.hg.1	ENST00000529355.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100006840.hg.1	ENST00000529355.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100006840.hg.1	ENST00000529355.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100006840.hg.1	ENST00000529898.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100006840.hg.1	ENST00000529898.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100006840.hg.1	ENST00000529898.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100006840.hg.1	ENST00000529898.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100006840.hg.1	NM_014633.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100006840.hg.1	NM_014633.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100006840.hg.1	NM_014633.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100006840.hg.1	NM_014633.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100006840.hg.1	NM_014633.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100006840.hg.1	NM_014633.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100006840.hg.1	NM_014633.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100006840.hg.1	NM_014633.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100006840.hg.1	NM_014633.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100006840.hg.1	NM_014633.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100006840.hg.1	NM_014633.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100006840.hg.1	NM_014633.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100006840.hg.1	NM_014633.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100006840.hg.1	NM_014633.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100006840.hg.1	NM_014633.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100006840.hg.1	NM_014633.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100006840.hg.1	NM_014633.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100006840.hg.1	NM_014633.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100006840.hg.1	NM_014633.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100006840.hg.1	NM_014633.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100006840.hg.1	NM_014633.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100006840.hg.1	NM_014633.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100006840.hg.1	NM_014633.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100006840.hg.1	NM_014633.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100006840.hg.1	NM_014633.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100006840.hg.1	NM_014633.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100006840.hg.1	NM_014633.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100006840.hg.1	NM_014633.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100006840.hg.1	NM_014633.4	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR11002531.hg.1	ENST00000361367.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR11002531.hg.1	NM_014633.4	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR11002531.hg.1	TC11000187.hg.1	HTA TC
Affymetrix Human Clariom D Assay	TC1100006840.hg.1	ENST00000361367.6	Ensembl
Affymetrix Human Clariom D Assay	TC1100006840.hg.1	ENST00000361367.6	Ensembl
Affymetrix Human Clariom D Assay	TC1100006840.hg.1	ENST00000361367.6	Ensembl
Affymetrix Human Clariom D Assay	TC1100006840.hg.1	ENST00000361367.6	Ensembl
Affymetrix Human Clariom D Assay	TC1100006840.hg.1	ENST00000361367.6	Ensembl
Affymetrix Human Clariom D Assay	TC1100006840.hg.1	ENST00000361367.6	Ensembl
Affymetrix Human Clariom D Assay	TC1100006840.hg.1	ENST00000361367.6	Ensembl
Affymetrix Human Clariom D Assay	TC1100006840.hg.1	ENST00000361367.6	Ensembl
Affymetrix Human Clariom D Assay	TC1100006840.hg.1	ENST00000361367.6	Ensembl
Affymetrix Human Clariom D Assay	TC1100006840.hg.1	ENST00000361367.6	Ensembl
Affymetrix Human Clariom D Assay	TC1100006840.hg.1	ENST00000361367.6	Ensembl
Affymetrix Human Clariom D Assay	TC1100006840.hg.1	ENST00000361367.6	Ensembl
Affymetrix Human Clariom D Assay	TC1100006840.hg.1	ENST00000361367.6	Ensembl
Affymetrix Human Clariom D Assay	TC1100006840.hg.1	ENST00000361367.6	Ensembl
Affymetrix Human Clariom D Assay	TC1100006840.hg.1	ENST00000361367.6	Ensembl
Affymetrix Human Clariom D Assay	TC1100006840.hg.1	ENST00000361367.6	Ensembl
Affymetrix Human Clariom D Assay	TC1100006840.hg.1	ENST00000361367.6	Ensembl
Affymetrix Human Clariom D Assay	TC1100006840.hg.1	ENST00000361367.6	Ensembl
Affymetrix Human Clariom D Assay	TC1100006840.hg.1	ENST00000361367.6	Ensembl
Affymetrix Human Clariom D Assay	TC1100006840.hg.1	ENST00000361367.6	Ensembl
Affymetrix Human Clariom D Assay	TC1100006840.hg.1	ENST00000361367.6	Ensembl
Affymetrix Human Clariom D Assay	TC1100006840.hg.1	ENST00000361367.6	Ensembl
Affymetrix Human Clariom D Assay	TC1100006840.hg.1	ENST00000361367.6	Ensembl
Affymetrix Human Clariom D Assay	TC1100006840.hg.1	ENST00000361367.6	Ensembl
Affymetrix Human Clariom D Assay	TC1100006840.hg.1	ENST00000361367.6	Ensembl
Affymetrix Human Clariom D Assay	TC1100006840.hg.1	ENST00000361367.6	Ensembl
Affymetrix Human Clariom D Assay	TC1100006840.hg.1	ENST00000361367.6	Ensembl
Affymetrix Human Clariom D Assay	TC1100006840.hg.1	ENST00000361367.6	Ensembl
Affymetrix Human Clariom D Assay	TC1100006840.hg.1	ENST00000361367.6	Ensembl
Affymetrix Human Clariom D Assay	TC1100006840.hg.1	ENST00000524523.1	Ensembl
Affymetrix Human Clariom D Assay	TC1100006840.hg.1	ENST00000524523.1	Ensembl
Affymetrix Human Clariom D Assay	TC1100006840.hg.1	ENST00000524523.1	Ensembl
Affymetrix Human Clariom D Assay	TC1100006840.hg.1	ENST00000524523.1	Ensembl
Affymetrix Human Clariom D Assay	TC1100006840.hg.1	ENST00000524523.1	Ensembl
Affymetrix Human Clariom D Assay	TC1100006840.hg.1	ENST00000524523.1	Ensembl
Affymetrix Human Clariom D Assay	TC1100006840.hg.1	ENST00000524523.1	Ensembl
Affymetrix Human Clariom D Assay	TC1100006840.hg.1	ENST00000526874.5	Ensembl
Affymetrix Human Clariom D Assay	TC1100006840.hg.1	ENST00000526874.5	Ensembl
Affymetrix Human Clariom D Assay	TC1100006840.hg.1	ENST00000526874.5	Ensembl
Affymetrix Human Clariom D Assay	TC1100006840.hg.1	ENST00000526874.5	Ensembl
Affymetrix Human Clariom D Assay	TC1100006840.hg.1	ENST00000526874.5	Ensembl
Affymetrix Human Clariom D Assay	TC1100006840.hg.1	ENST00000529355.1	Ensembl
Affymetrix Human Clariom D Assay	TC1100006840.hg.1	ENST00000529355.1	Ensembl
Affymetrix Human Clariom D Assay	TC1100006840.hg.1	ENST00000529355.1	Ensembl
Affymetrix Human Clariom D Assay	TC1100006840.hg.1	ENST00000529355.1	Ensembl
Affymetrix Human Clariom D Assay	TC1100006840.hg.1	ENST00000529898.1	Ensembl
Affymetrix Human Clariom D Assay	TC1100006840.hg.1	ENST00000529898.1	Ensembl
Affymetrix Human Clariom D Assay	TC1100006840.hg.1	ENST00000529898.1	Ensembl
Affymetrix Human Clariom D Assay	TC1100006840.hg.1	ENST00000529898.1	Ensembl
Affymetrix Human Clariom D Assay	TC1100006840.hg.1	NM_014633.4	Refseq
Affymetrix Human Clariom D Assay	TC1100006840.hg.1	NM_014633.4	Refseq
Affymetrix Human Clariom D Assay	TC1100006840.hg.1	NM_014633.4	Refseq
Affymetrix Human Clariom D Assay	TC1100006840.hg.1	NM_014633.4	Refseq
Affymetrix Human Clariom D Assay	TC1100006840.hg.1	NM_014633.4	Refseq
Affymetrix Human Clariom D Assay	TC1100006840.hg.1	NM_014633.4	Refseq
Affymetrix Human Clariom D Assay	TC1100006840.hg.1	NM_014633.4	Refseq
Affymetrix Human Clariom D Assay	TC1100006840.hg.1	NM_014633.4	Refseq
Affymetrix Human Clariom D Assay	TC1100006840.hg.1	NM_014633.4	Refseq
Affymetrix Human Clariom D Assay	TC1100006840.hg.1	NM_014633.4	Refseq
Affymetrix Human Clariom D Assay	TC1100006840.hg.1	NM_014633.4	Refseq
Affymetrix Human Clariom D Assay	TC1100006840.hg.1	NM_014633.4	Refseq
Affymetrix Human Clariom D Assay	TC1100006840.hg.1	NM_014633.4	Refseq
Affymetrix Human Clariom D Assay	TC1100006840.hg.1	NM_014633.4	Refseq
Affymetrix Human Clariom D Assay	TC1100006840.hg.1	NM_014633.4	Refseq
Affymetrix Human Clariom D Assay	TC1100006840.hg.1	NM_014633.4	Refseq
Affymetrix Human Clariom D Assay	TC1100006840.hg.1	NM_014633.4	Refseq
Affymetrix Human Clariom D Assay	TC1100006840.hg.1	NM_014633.4	Refseq
Affymetrix Human Clariom D Assay	TC1100006840.hg.1	NM_014633.4	Refseq
Affymetrix Human Clariom D Assay	TC1100006840.hg.1	NM_014633.4	Refseq
Affymetrix Human Clariom D Assay	TC1100006840.hg.1	NM_014633.4	Refseq
Affymetrix Human Clariom D Assay	TC1100006840.hg.1	NM_014633.4	Refseq
Affymetrix Human Clariom D Assay	TC1100006840.hg.1	NM_014633.4	Refseq
Affymetrix Human Clariom D Assay	TC1100006840.hg.1	NM_014633.4	Refseq
Affymetrix Human Clariom D Assay	TC1100006840.hg.1	NM_014633.4	Refseq
Affymetrix Human Clariom D Assay	TC1100006840.hg.1	NM_014633.4	Refseq
Affymetrix Human Clariom D Assay	TC1100006840.hg.1	NM_014633.4	Refseq
Affymetrix Human Clariom D Assay	TC1100006840.hg.1	NM_014633.4	Refseq
Affymetrix Human Clariom D Assay	TC1100006840.hg.1	NM_014633.4	Refseq
Affymetrix Human Clariom D Assay	PSR1100148111.hg.1	ENST00000361367.6	Ensembl
Affymetrix Human Clariom D Assay	PSR1100148111.hg.1	ENST00000524523.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1100148111.hg.1	NM_014633.4	Refseq
Affymetrix Human Clariom D Assay	PSR1100148111.hg.1	ENST00000361367.6	Ensembl
Affymetrix Human Clariom D Assay	PSR1100148111.hg.1	ENST00000524523.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1100148111.hg.1	NM_014633.4	Refseq
Affymetrix Human Clariom D Assay	PSR1100148111.hg.1	TC1100006840.hg.1	Clariom D TC